Aliases for TPI1P1 Gene

Aliases for TPI1P1 Gene

  • Triosephosphate Isomerase 1 Pseudogene 1 2 3 5
  • TPI1 Pseudogene 3
  • RCTPI1 3
  • TPI1P1 5

External Ids for TPI1P1 Gene

Previous GeneCards Identifiers for TPI1P1 Gene

  • GC01P077166
  • GC01P075295

Summaries for TPI1P1 Gene

GeneCards Summary for TPI1P1 Gene

TPI1P1 (Triosephosphate Isomerase 1 Pseudogene 1) is a Pseudogene.

Additional gene information for TPI1P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for TPI1P1 Gene

Genomics for TPI1P1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for TPI1P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J076700 Enhancer 0.3 FANTOM5 600.7 +0.6 578 0.2 TPI1P1 piR-37778-001 RNU6-161P ST6GALNAC5 ST6GALNAC3
GH01J076687 Enhancer 0.7 Ensembl ENCODE 0.4 -12.2 -12236 0.6 RFX1 POLR2A BMI1 CTBP1 PKNOX1 ZNF217 SREBF1 TPI1P1 ENSG00000272855 ST6GALNAC5 ST6GALNAC3
GH01J076674 Enhancer 0.7 ENCODE 0.3 -25.6 -25604 0.2 GATAD2A REST IRF2 SP1 CEBPA SOX13 FOXA1 FOXA2 YY1 GABPA TPI1P1 ENSG00000272855 ST6GALNAC5 ST6GALNAC3
GH01J076668 Enhancer 0.6 Ensembl 0.3 -31.7 -31654 0.2 YY1 PKNOX1 ZBTB44 ZBTB20 RELB OSR2 ZBTB17 BCL11A ZNF843 FEZF1 RNU6-161P ENSG00000272855 TPI1P1 ST6GALNAC5 ST6GALNAC3
GH01J076666 Enhancer 0.5 Ensembl 0.3 -33.0 -32954 0.4 SP1 YY1 HNF4A RXRA HNF4G ENSG00000272855 TPI1P1 ST6GALNAC5 ST6GALNAC3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around TPI1P1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for TPI1P1 Gene

Genomic Locations for TPI1P1 Gene
chr1:76,699,755-76,701,025
(GRCh38/hg38)
Size:
1,271 bases
Orientation:
Plus strand
chr1:77,165,449-77,166,665
(GRCh37/hg19)
Size:
1,217 bases
Orientation:
Plus strand

Genomic View for TPI1P1 Gene

Genes around TPI1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TPI1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TPI1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TPI1P1 Gene

Proteins for TPI1P1 Gene

Post-translational modifications for TPI1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TPI1P1 Gene

Domains & Families for TPI1P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for TPI1P1 Gene

Function for TPI1P1 Gene

Phenotypes From GWAS Catalog for TPI1P1 Gene

genes like me logo Genes that share phenotypes with TPI1P1: view

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TPI1P1 Gene

Localization for TPI1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TPI1P1 Gene

Pathways & Interactions for TPI1P1 Gene

PathCards logo

SuperPathways for TPI1P1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for TPI1P1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for TPI1P1 Gene

Drugs & Compounds for TPI1P1 Gene

No Compound Related Data Available

Transcripts for TPI1P1 Gene

mRNA/cDNA for TPI1P1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for TPI1P1 Gene

No ASD Table

Relevant External Links for TPI1P1 Gene

GeneLoc Exon Structure for
TPI1P1

Expression for TPI1P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for TPI1P1 Gene

genes like me logo Genes that share expression patterns with TPI1P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TPI1P1 Gene

Orthologs for TPI1P1 Gene

Evolution for TPI1P1 Gene

ENSEMBL:
Gene Tree for TPI1P1 (if available)
TreeFam:
Gene Tree for TPI1P1 (if available)

No data available for Orthologs for TPI1P1 Gene

Paralogs for TPI1P1 Gene

No data available for Paralogs for TPI1P1 Gene

Variants for TPI1P1 Gene

Additional Variant Information for TPI1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TPI1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TPI1P1 Gene

Disorders for TPI1P1 Gene

Additional Disease Information for TPI1P1

Genetic Association Database
(GAD)

No disorders were found for TPI1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TPI1P1 Gene

Publications for TPI1P1 Gene

  1. Quantitative Lys-ϵ-Gly-Gly (diGly) proteomics coupled with inducible RNAi reveals ubiquitin-mediated proteolysis of DNA damage-inducible transcript 4 (DDIT4) by the E3 ligase HUWE1. (PMID: 25147182) Thompson JW … Luchansky SJ (The Journal of biological chemistry 2014) 3
  2. Proteomic Analysis of the EWS-Fli-1 Interactome Reveals the Role of the Lysosome in EWS-Fli-1 Turnover. (PMID: 24999758) Elzi DJ … Shiio Y (Journal of proteome research 2014) 3
  3. Dynamics of cullin-RING ubiquitin ligase network revealed by systematic quantitative proteomics. (PMID: 21145461) Bennett EJ … Harper JW (Cell 2010) 3
  4. A genome-wide association for kidney function and endocrine-related traits in the NHLBI's Framingham Heart Study. (PMID: 17903292) Hwang SJ … Fox CS (BMC medical genetics 2007) 41
  5. Emergence of young human genes after a burst of retroposition in primates. (PMID: 16201836) Marques AC … Kaessmann H (PLoS biology 2005) 3

Products for TPI1P1 Gene

Sources for TPI1P1 Gene