Aliases for TP73-AS1 Gene

Subcategory (RNA class) for TP73-AS1 Gene

lncRNA

Quality Score for this RNA gene is

14

Aliases for TP73-AS1 Gene

  • TP73 Antisense RNA 1 2 3 5
  • P53-Dependent Apoptosis Modulator 2 3
  • KIAA0495 2 3
  • TP73 Antisense RNA 1 (Non-Protein Coding) 3
  • HSALNG0000343 169
  • Lnc-LRRC47-78 170
  • NONHSAG000195 94
  • HSALNG0000344 169
  • TP73-AS1 2
  • PDAM 3

External Ids for TP73-AS1 Gene

Previous HGNC Symbols for TP73-AS1 Gene

  • KIAA0495

Previous GeneCards Identifiers for TP73-AS1 Gene

  • GC01M003653

Summaries for TP73-AS1 Gene

GeneCards Summary for TP73-AS1 Gene

TP73-AS1 (TP73 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class. Diseases associated with TP73-AS1 include Brain Glioma and Astrocytoma.

Rfam classification for TP73-AS1 Gene

  • TP73 antisense RNA 1 conserved region

Additional gene information for TP73-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for TP73-AS1 Gene

Genomics for TP73-AS1 Gene

GeneHancer (GH) Regulatory Elements for TP73-AS1 Gene

Promoters and enhancers for TP73-AS1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around TP73-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TP73-AS1 Gene

Genomic Locations for TP73-AS1 Gene
chr1:3,734,286-3,747,375
(GRCh38/hg38)
Size:
13,090 bases
Orientation:
Minus strand
chr1:3,652,548-3,663,937
(GRCh37/hg19)
Size:
11,390 bases
Orientation:
Minus strand

Genomic View for TP73-AS1 Gene

Genes around TP73-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TP73-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TP73-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TP73-AS1 Gene

Proteins for TP73-AS1 Gene

Post-translational modifications for TP73-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TP73-AS1 Gene

Domains & Families for TP73-AS1 Gene

Gene Families for TP73-AS1 Gene

Suggested Antigen Peptide Sequences for TP73-AS1 Gene

GenScript: Design optimal peptide antigens:
  • p53-dependent apoptosis modulator (T73AS_HUMAN)
genes like me logo Genes that share domains with TP73-AS1: view

No data available for Protein Domains , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for TP73-AS1 Gene

Function for TP73-AS1 Gene

Phenotypes From GWAS Catalog for TP73-AS1 Gene

Phenotypes for TP73-AS1 Gene

genes like me logo Genes that share phenotypes with TP73-AS1: view

Animal Model Products

CRISPR Products

miRNA for TP73-AS1 Gene

miRTarBase miRNAs that target TP73-AS1

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for TP73-AS1

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for TP73-AS1 Gene

Localization for TP73-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TP73-AS1 Gene

Pathways & Interactions for TP73-AS1 Gene

PathCards logo

SuperPathways for TP73-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for TP73-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TP73-AS1 Gene

Drugs & Compounds for TP73-AS1 Gene

No Compound Related Data Available

Transcripts for TP73-AS1 Gene

CRISPR Products

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for TP73-AS1

Alternative Splicing Database (ASD) splice patterns (SP) for TP73-AS1 Gene

No ASD Table

Relevant External Links for TP73-AS1 Gene

GeneLoc Exon Structure for
TP73-AS1
ECgene alternative splicing isoforms for
TP73-AS1

Expression for TP73-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TP73-AS1 Gene

SOURCE GeneReport for Unigene cluster for TP73-AS1 Gene:

Hs.49658
genes like me logo Genes that share expression patterns with TP73-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TP73-AS1 Gene

Orthologs for TP73-AS1 Gene

Evolution for TP73-AS1 Gene

ENSEMBL:
Gene Tree for TP73-AS1 (if available)
TreeFam:
Gene Tree for TP73-AS1 (if available)

No data available for Orthologs for TP73-AS1 Gene

Paralogs for TP73-AS1 Gene

No data available for Paralogs for TP73-AS1 Gene

Variants for TP73-AS1 Gene

Sequence variations from dbSNP and Humsavar for TP73-AS1 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000118289 -- 3,736,068(-) G/C non_coding_transcript_variant
rs1000232500 -- 3,736,307(-) T/G non_coding_transcript_variant
rs1000244019 -- 3,739,694(-) A/C intron_variant, non_coding_transcript_variant
rs1000316222 -- 3,740,087(-) T/A/C intron_variant, non_coding_transcript_variant
rs1000429954 -- 3,740,067(-) A/C/G intron_variant, non_coding_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for TP73-AS1 Gene

Variant ID Type Subtype PubMed ID
dgv13n100 CNV gain 25217958
esv2758916 CNV gain 17122850
esv3585042 CNV gain 21293372
esv994567 CNV deletion 20482838
nsv1001715 CNV loss 25217958
nsv1012423 CNV gain 25217958
nsv460061 CNV loss 19166990
nsv470687 CNV loss 18288195
nsv478669 CNV novel sequence insertion 20440878
nsv545129 CNV loss 21841781
nsv830314 CNV gain+loss 17160897
nsv830425 CNV gain 17160897
nsv951959 CNV deletion 24416366

Additional Variant Information for TP73-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TP73-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for TP73-AS1 Gene

Disorders for TP73-AS1 Gene

MalaCards: The human disease database

(8) MalaCards diseases for TP73-AS1 Gene - From: LncRNADisease, DISEASES, and GeneCards

Disorder Aliases PubMed IDs
brain glioma
  • lower grade glioma
astrocytoma
  • astrocytic tumor
myeloma, multiple
  • multiple myeloma, susceptibility to
glioma
glioblastoma
  • glioblastoma multiforme
- elite association - COSMIC cancer census association via MalaCards

Additional Disease Information for TP73-AS1

genes like me logo Genes that share disorders with TP73-AS1: view

No data available for UniProtKB/Swiss-Prot and Genatlas for TP73-AS1 Gene

Publications for TP73-AS1 Gene

  1. The long non-coding RNA TP73-AS1 modulates HCC cell proliferation through miR-200a-dependent HMGB1/RAGE regulation. (PMID: 28403886) Li S … Fan XG (Journal of experimental & clinical cancer research : CR 2017) 2 3 56
  2. A long non-coding RNA signature in glioblastoma multiforme predicts survival. (PMID: 23726844) Zhang XQ … Leung GK (Neurobiology of disease 2013) 2 3 56
  3. KIAA0495/PDAM is frequently downregulated in oligodendroglial tumors and its knockdown by siRNA induces cisplatin resistance in glioma cells. (PMID: 20477830) Pang JC … Ng HK (Brain pathology (Zurich, Switzerland) 2010) 2 3 56
  4. LncRNA TP73-AS1 promoted the progression of lung adenocarcinoma via PI3K/AKT pathway. (PMID: 30541897) Liu C … Wang S (Bioscience reports 2019) 3 56
  5. LncRNA TP73-AS1 is upregulated in non-small cell lung cancer and predicts poor survival. (PMID: 31129247) Zhu D … Qian X (Gene 2019) 3 56

Products for TP73-AS1 Gene

Sources for TP73-AS1 Gene