Aliases for TP53TG3F Gene

Aliases for TP53TG3F Gene

  • TP53 Target 3 Family Member F 2 3 5
  • TP53-Inducible Gene 3 Protein 3 4
  • TP53-Target Gene 3 Protein 3 4
  • TP53TG3B 3
  • TP53TG3C 3
  • TP53TG3D 3
  • TP53TG3E 3
  • TP53TG3F 5
  • TP53TG3A 4
  • TP53TG3 3

External Ids for TP53TG3F Gene

Summaries for TP53TG3F Gene

GeneCards Summary for TP53TG3F Gene

TP53TG3F (TP53 Target 3 Family Member F) is a Protein Coding gene. An important paralog of this gene is LOC102723713.

UniProtKB/Swiss-Prot Summary for TP53TG3F Gene

Additional gene information for TP53TG3F Gene

No data available for Entrez Gene Summary , CIViC Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for TP53TG3F Gene

Genomics for TP53TG3F Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for TP53TG3F Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J033459 Promoter 0.3 Ensembl 0.7 +2.9 2944 1.4 NONHSAG019235.2-004 piR-43901-006 TP53TG3F piR-44170-006 IGHV3OR16-17 LOC105369266
GH16J033491 Enhancer 0.7 ENCODE 0.3 +34.4 34393 0.2 ZNF148 RUNX1 ZNF571 ZNF398 RFX5 HSF1 ZSCAN26 ZNF544 ZNF473 SMARCE1 HSALNG0110999 piR-31075-016 ENSG00000260141 ENSG00000261200 LOC105379474 TP53TG3F IGHV3OR16-17 LOC105369266
GH16J033707 Enhancer 0.7 FANTOM5 0.1 +250.1 250121 0.1 SUPT5H SMARCA4 EGR1 NRF1 L3MBTL2 MEIS2 PHF20 CTCF ZNF24 RNF2 BMS1P8 HSALNG0111014 piR-59382-005 piR-55364-007 lnc-TP53TG3F-10 IGHV3OR16-17 TP53TG3F LOC105369266
GH16J033646 Enhancer 0.4 Ensembl 0.1 +189.4 189444 0.4 SMARCE1 ATF3 FOS MTA1 piR-48890-001 piR-61942-002 TP53TG3F IGHV3OR16-17 LOC105369266
GH16J033655 Enhancer 0.5 ENCODE 0.1 +199.3 199283 0.1 ZNF654 REST TRIM22 SMARCA5 SKIL RAD21 CTCF RFX1 piR-40110-238 piR-48810-004 IGHV3OR16-17 TP53TG3F LOC105369266
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around TP53TG3F on the GeneHancer Hub at the UCSC Golden Path

Cistromic (ChIP-Seq) regulation report from SPP (The Signaling Pathways Project) for TP53TG3F

Genomic Locations for TP53TG3F Gene

Latest Assembly
chr16:33,457,156-33,462,258
(GRCh38/hg38)
Size:
5,103 bases
Orientation:
Plus strand

Genomic View for TP53TG3F Gene

Genes around TP53TG3F on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TP53TG3F Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TP53TG3F Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TP53TG3F Gene

Proteins for TP53TG3F Gene

  • Protein details for TP53TG3F Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9ULZ0-T53G3_HUMAN
    Recommended name:
    TP53-target gene 3 protein
    Protein Accession:
    Q9ULZ0
    Secondary Accessions:
    • B2R5K6
    • Q4KN31
    • Q9ULY9

    Protein attributes for TP53TG3F Gene

    Size:
    124 amino acids
    Molecular mass:
    12828 Da
    Quaternary structure:
    No Data Available
    Miscellaneous:
    • [Isoform 1]: May be produced at very low levels due to a premature stop codon in the mRNA, leading to nonsense-mediated mRNA decay.

    Alternative splice isoforms for TP53TG3F Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for TP53TG3F Gene

Post-translational modifications for TP53TG3F Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for TP53TG3F Gene

No data available for DME Specific Peptides for TP53TG3F Gene

Domains & Families for TP53TG3F Gene

Gene Families for TP53TG3F Gene

Human Protein Atlas (HPA):
  • Predicted intracellular proteins
genes like me logo Genes that share domains with TP53TG3F: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for TP53TG3F Gene

Function for TP53TG3F Gene

Molecular function for TP53TG3F Gene

UniProtKB/Swiss-Prot Function:
May play a significant role in p53/TP53-mediating signaling pathway.
UniProtKB/Swiss-Prot Induction:
By p53/TP53.

No data available for Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TP53TG3F Gene

Localization for TP53TG3F Gene

Subcellular locations from UniProtKB/Swiss-Prot for TP53TG3F Gene

Cytoplasm. Nucleus.

Subcellular locations from the

Human Protein Atlas (HPA)
  • Centriolar satellite (2)
See all subcellular structures

Gene Ontology (GO) - Cellular Components for TP53TG3F Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IEA,IDA 10534768
GO:0005737 cytoplasm IEA,IDA 10534768
genes like me logo Genes that share ontologies with TP53TG3F: view

No data available for Subcellular locations from COMPARTMENTS for TP53TG3F Gene

Pathways & Interactions for TP53TG3F Gene

PathCards logo

SuperPathways for TP53TG3F Gene

No Data Available

Interacting Proteins for TP53TG3F Gene

Selected Interacting proteins: Q9ULZ0-T53G3_HUMAN for TP53TG3F Gene via IID

Symbol External ID(s) Details
ELAVL1
LRRK2

Gene Ontology (GO) - Biological Process for TP53TG3F Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TP53TG3F Gene

Drugs & Compounds for TP53TG3F Gene

No Compound Related Data Available

Transcripts for TP53TG3F Gene

mRNA/cDNA for TP53TG3F Gene

1 REFSEQ mRNAs :
6 NCBI additional mRNA sequence :
2 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TP53TG3F Gene

No ASD Table

Relevant External Links for TP53TG3F Gene

GeneLoc Exon Structure for
TP53TG3F

Expression for TP53TG3F Gene

mRNA Expression by UniProt/SwissProt for TP53TG3F Gene:

Q9ULZ0-T53G3_HUMAN
Tissue specificity: Strongly expressed in testis. Weakly expressed in heart, placenta and skeletal muscle.

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TP53TG3F Gene

Orthologs for TP53TG3F Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for TP53TG3F Gene

Organism Taxonomy Gene Similarity Type Details
Chimpanzee
(Pan troglodytes)
Mammalia LOC745451 29
  • 98.99 (n)
Species where no ortholog for TP53TG3F was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Eremothecium gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • Alpha proteobacteria (Wolbachia pipientis)
  • Amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • Baker's yeast (Saccharomyces cerevisiae)
  • Barley (Hordeum vulgare)
  • Beta proteobacteria (Neisseria meningitidis)
  • Bread mold (Neurospora crassa)
  • Chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • Common water flea (Daphnia pulex)
  • Corn (Zea mays)
  • Cow (Bos Taurus)
  • Dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • Filamentous fungi (Aspergillus nidulans)
  • Firmicute Bacteria (Streptococcus pneumoniae)
  • Fission Yeast (Schizosaccharomyces pombe)
  • Fruit Fly (Drosophila melanogaster)
  • Green Algae (Chlamydomonas reinhardtii)
  • Honey Bee (Apis mellifera)
  • K. Lactis Yeast (Kluyveromyces lactis)
  • Lizard (Anolis carolinensis)
  • Loblloly Pine (Pinus taeda)
  • Malaria Parasite (Plasmodium falciparum)
  • Medicago Trunc (Medicago Truncatula)
  • Moss (Physcomitrella patens)
  • Mouse (Mus musculus)
  • Oppossum (Monodelphis domestica)
  • Orangutan (Pongo pygmaeus)
  • Pig (Sus scrofa)
  • Platypus (Ornithorhynchus anatinus)
  • Rainbow Trout (Oncorhynchus mykiss)
  • Rat (Rattus norvegicus)
  • Rice (Oryza sativa)
  • Rice Blast Fungus (Magnaporthe grisea)
  • Schistosome Parasite (Schistosoma mansoni)
  • Sea Anemone (Nematostella vectensis)
  • Sea Vase (Ciona intestinalis)
  • Sea Squirt (Ciona savignyi)
  • Sea Urchin (Strongylocentrotus purpuratus)
  • Sorghum (Sorghum bicolor)
  • Soybean (Glycine max)
  • Stem Rust Fungus (Puccinia graminis)
  • Sugarcane (Saccharum officinarum)
  • Thale Cress (Arabidopsis thaliana)
  • Tomato (Lycopersicon esculentum)
  • Toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • Tropical Clawed Frog (Silurana tropicalis)
  • Wheat (Triticum aestivum)
  • Worm (Caenorhabditis elegans)
  • Zebrafish (Danio rerio)

Evolution for TP53TG3F Gene

ENSEMBL:
Gene Tree for TP53TG3F (if available)
TreeFam:
Gene Tree for TP53TG3F (if available)
Alliance of Genome Resources:
Additional Orthologs for TP53TG3F

Paralogs for TP53TG3F Gene

genes like me logo Genes that share paralogs with TP53TG3F: view

Variants for TP53TG3F Gene

Additional Variant Information for TP53TG3F Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TP53TG3F
Leiden Open Variation Database (LOVD)
TP53TG3F

SNP Genotyping and Copy Number Assays for research

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TP53TG3F Gene

Disorders for TP53TG3F Gene

Additional Disease Information for TP53TG3F

No disorders were found for TP53TG3F Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TP53TG3F Gene

Publications for TP53TG3F Gene

  1. Isolation and characterization of a novel TP53-inducible gene, TP53TG3. (PMID: 10534768) Ng CC … Nakamura Y (Genes, chromosomes & cancer 1999) 3 4
  2. The full-ORF clone resource of the German cDNA Consortium. (PMID: 17974005) Bechtel S … Schupp I (BMC genomics 2007) 4
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 4
  4. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 4

Products for TP53TG3F Gene

Sources for TP53TG3F Gene