Aliases for TP53TG1 Gene

Subcategory (RNA class) for TP53TG1 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for TP53TG1 Gene

  • TP53 Target 1 2 3 5
  • Long Intergenic Non-Protein Coding RNA 96 2 3
  • TP53 Target 1 (Non-Protein Coding) 2 3
  • TP53 Activated Protein 1 2 3
  • TP53 Target Gene 1 2 3
  • NONHSAG048130 92
  • HSALNG0059377 167
  • H_RG012D21.9 3
  • NCRNA00096 3
  • LINC00096 3
  • P53TG1-D 3
  • TP53AP1 3
  • TP53TG1 168
  • P53TG1 3

External Ids for TP53TG1 Gene

Previous HGNC Symbols for TP53TG1 Gene

  • TP53AP1

Previous GeneCards Identifiers for TP53TG1 Gene

  • GC07M085489
  • GC07U902535
  • GC07M086792
  • GC07M086954
  • GC07M081565

Summaries for TP53TG1 Gene

GeneCards Summary for TP53TG1 Gene

TP53TG1 (TP53 Target 1) is an RNA Gene, and is affiliated with the lncRNA class. Diseases associated with TP53TG1 include Glioma and Lung Cancer.

Rfam classification for TP53TG1 Gene

  • TP53 target 1 conserved region 2
  • TP53 target 1 conserved region 1

Additional gene information for TP53TG1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for TP53TG1 Gene

Genomics for TP53TG1 Gene

GeneHancer (GH) Regulatory Elements for TP53TG1 Gene

Promoters and enhancers for TP53TG1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around TP53TG1 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the TP53TG1 gene promoter:
  • FOXI1
  • HFH-3
  • Oct-B1
  • oct-B2
  • oct-B3
  • POU2F1
  • POU2F1a
  • POU2F2
  • POU2F2B
  • POU2F2C

Genomic Locations for TP53TG1 Gene

Genomic Locations for TP53TG1 Gene
chr7:87,322,943-87,345,567
(GRCh38/hg38)
Size:
22,625 bases
Orientation:
Minus strand
chr7:86,954,541-86,974,831
(GRCh37/hg19)
Size:
20,291 bases
Orientation:
Minus strand

Genomic View for TP53TG1 Gene

Genes around TP53TG1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TP53TG1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TP53TG1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TP53TG1 Gene

Proteins for TP53TG1 Gene

Post-translational modifications for TP53TG1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TP53TG1 Gene

Domains & Families for TP53TG1 Gene

Gene Families for TP53TG1 Gene

Suggested Antigen Peptide Sequences for TP53TG1 Gene

GenScript: Design optimal peptide antigens:
  • Tumor protein p53-activated protein 1 (T53G1_HUMAN)
genes like me logo Genes that share domains with TP53TG1: view

No data available for Protein Domains , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for TP53TG1 Gene

Function for TP53TG1 Gene

Phenotypes From GWAS Catalog for TP53TG1 Gene

Phenotypes for TP53TG1 Gene

genes like me logo Genes that share phenotypes with TP53TG1: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TP53TG1 Gene

Localization for TP53TG1 Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for TP53TG1 gene
Compartment Confidence
plasma membrane 1
cytoskeleton 1
nucleus 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TP53TG1 Gene

Pathways & Interactions for TP53TG1 Gene

PathCards logo

SuperPathways for TP53TG1 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for TP53TG1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for TP53TG1 Gene

Drugs & Compounds for TP53TG1 Gene

No Compound Related Data Available

Transcripts for TP53TG1 Gene

mRNA/cDNA for TP53TG1 Gene

35 RNACentral transcripts :
1 REFSEQ mRNAs :
11 NCBI additional mRNA sequence :
10 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
12 NONCODE transcripts :
13 LncBook transcripts :
26 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for TP53TG1 Gene

ExUns: 1a · 1b · 1c · 1d · 1e ^ 2
SP1: -
SP2:
SP3: - -
SP4: -

Relevant External Links for TP53TG1 Gene

GeneLoc Exon Structure for
TP53TG1

Expression for TP53TG1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for TP53TG1 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for TP53TG1

SOURCE GeneReport for Unigene cluster for TP53TG1 Gene:

Hs.274329
genes like me logo Genes that share expression patterns with TP53TG1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TP53TG1 Gene

Orthologs for TP53TG1 Gene

Evolution for TP53TG1 Gene

ENSEMBL:
Gene Tree for TP53TG1 (if available)
TreeFam:
Gene Tree for TP53TG1 (if available)

No data available for Orthologs for TP53TG1 Gene

Paralogs for TP53TG1 Gene

No data available for Paralogs for TP53TG1 Gene

Variants for TP53TG1 Gene

Additional dbSNP identifiers (rs#s) for TP53TG1 Gene

Structural Variations from Database of Genomic Variants (DGV) for TP53TG1 Gene

Variant ID Type Subtype PubMed ID
esv3304880 CNV mobile element insertion 20981092
esv3307982 CNV mobile element insertion 20981092
esv3391965 CNV insertion 20981092
esv3423823 CNV insertion 20981092
esv3449592 CNV insertion 20981092
nsv1022111 CNV loss 25217958
nsv428177 CNV loss 18775914
nsv464622 CNV gain 19166990
nsv607725 CNV gain 21841781
nsv970548 CNV duplication 23825009

Additional Variant Information for TP53TG1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TP53TG1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for TP53TG1 Gene

Disorders for TP53TG1 Gene

MalaCards: The human disease database

(3) MalaCards diseases for TP53TG1 Gene - From: LncRNADisease and DISEASES

Disorder Aliases PubMed IDs
glioma
lung cancer
  • adenocarcinoma of lung
colorectal cancer
  • crc
- elite association - COSMIC cancer census association via MalaCards

Additional Disease Information for TP53TG1

genes like me logo Genes that share disorders with TP53TG1: view

No data available for UniProtKB/Swiss-Prot and Genatlas for TP53TG1 Gene

Publications for TP53TG1 Gene

  1. TP53TG1 enhances cisplatin sensitivity of non-small cell lung cancer cells through regulating miR-18a/PTEN axis. (PMID: 29588850) Xiao H … Gao J (Cell & bioscience 2018) 2 3 54
  2. Isolation of a novel TP53 target gene from a colon cancer cell line carrying a highly regulated wild-type TP53 expression system. (PMID: 9713990) Takei Y … Nakamura Y (Genes, chromosomes & cancer 1998) 2 3 54
  3. Long noncoding RNA TP53TG1 promotes pancreatic ductal adenocarcinoma development by acting as a molecular sponge of microRNA-96. (PMID: 31325400) Zhang Y … Zhang X (Cancer science 2019) 3 54
  4. LncRNA-TP53TG1 Participated in the Stress Response Under Glucose Deprivation in Glioma. (PMID: 28569381) Chen X … Hao B (Journal of cellular biochemistry 2017) 3 54
  5. Epigenetic inactivation of the p53-induced long noncoding RNA TP53 target 1 in human cancer. (PMID: 27821766) Diaz-Lagares A … Esteller M (Proceedings of the National Academy of Sciences of the United States of America 2016) 3 54

Products for TP53TG1 Gene

Sources for TP53TG1 Gene