Aliases for TOMM22P6 Gene

Aliases for TOMM22P6 Gene

  • TOMM22 Pseudogene 6 2 3 5
  • Translocase Of Outer Mitochondrial Membrane 22 Homolog Pseudogene 6 3
  • TOMM22P6 5

External Ids for TOMM22P6 Gene

Previous GeneCards Identifiers for TOMM22P6 Gene

  • GC03M162206
  • GC03M159603

Summaries for TOMM22P6 Gene

GeneCards Summary for TOMM22P6 Gene

TOMM22P6 (TOMM22 Pseudogene 6) is a Pseudogene.

Additional gene information for TOMM22P6 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for TOMM22P6 Gene

Genomics for TOMM22P6 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for TOMM22P6 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03J162492 Enhancer 0.7 Ensembl ENCODE 0.4 -5.9 -5902 1.9 REST CEBPB SP1 JUND EP300 FOSL2 PRDM1 STAT3 BCL3 ENSG00000241168 TOMM22P6 lnc-SPTSSB-7 HSALNG0030339 OTOL1
GH03J162524 Enhancer 0.6 Ensembl ENCODE 0.3 -38.4 -38364 1.6 CEBPB NR2F2 NR3C1 ENSG00000241168 HSALNG0030339 TOMM22P6 lnc-SPTSSB-7
GH03J162459 Enhancer 0.3 Ensembl 0.3 +27.2 27248 0.2 FOXA1 piR-61514-120 TOMM22P6 lnc-SPTSSB-7 OTOL1
GH03J162507 Enhancer 0.2 Ensembl 0.4 -20.4 -20352 0.2 ENSG00000241168 lnc-SPTSSB-7 TOMM22P6 HSALNG0030339
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around TOMM22P6 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for TOMM22P6 Gene

Genomic Locations for TOMM22P6 Gene
chr3:162,486,519-162,486,949
(GRCh38/hg38)
Size:
431 bases
Orientation:
Minus strand
chr3:162,204,307-162,204,737
(GRCh37/hg19)
Size:
431 bases
Orientation:
Minus strand

Genomic View for TOMM22P6 Gene

Genes around TOMM22P6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TOMM22P6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TOMM22P6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TOMM22P6 Gene

Proteins for TOMM22P6 Gene

Post-translational modifications for TOMM22P6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TOMM22P6 Gene

Domains & Families for TOMM22P6 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for TOMM22P6 Gene

Function for TOMM22P6 Gene

Phenotypes From GWAS Catalog for TOMM22P6 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TOMM22P6 Gene

Localization for TOMM22P6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TOMM22P6 Gene

Pathways & Interactions for TOMM22P6 Gene

PathCards logo

SuperPathways for TOMM22P6 Gene

No Data Available

Gene Ontology (GO) - Biological Process for TOMM22P6 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for TOMM22P6 Gene

Drugs & Compounds for TOMM22P6 Gene

No Compound Related Data Available

Transcripts for TOMM22P6 Gene

mRNA/cDNA for TOMM22P6 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for TOMM22P6 Gene

No ASD Table

Relevant External Links for TOMM22P6 Gene

GeneLoc Exon Structure for
TOMM22P6

Expression for TOMM22P6 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for TOMM22P6 Gene

genes like me logo Genes that share expression patterns with TOMM22P6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TOMM22P6 Gene

Orthologs for TOMM22P6 Gene

Evolution for TOMM22P6 Gene

ENSEMBL:
Gene Tree for TOMM22P6 (if available)
TreeFam:
Gene Tree for TOMM22P6 (if available)

No data available for Orthologs for TOMM22P6 Gene

Paralogs for TOMM22P6 Gene

No data available for Paralogs for TOMM22P6 Gene

Variants for TOMM22P6 Gene

Additional Variant Information for TOMM22P6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TOMM22P6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TOMM22P6 Gene

Disorders for TOMM22P6 Gene

Additional Disease Information for TOMM22P6

Genetic Association Database
(GAD)

No disorders were found for TOMM22P6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TOMM22P6 Gene

Publications for TOMM22P6 Gene

  1. A genome-wide association study of aging. (PMID: 21782286) Walter S … Franceschini N (Neurobiology of aging 2011) 41
  2. Genome-wide association with select biomarker traits in the Framingham Heart Study. (PMID: 17903293) Benjamin EJ … Vasan RS (BMC medical genetics 2007) 41
  3. Genome-wide association to body mass index and waist circumference: the Framingham Heart Study 100K project. (PMID: 17903300) Fox CS … Atwood LD (BMC medical genetics 2007) 41
  4. Genome-wide association and linkage analyses of hemostatic factors and hematological phenotypes in the Framingham Heart Study. (PMID: 17903294) Yang Q … O'Donnell CJ (BMC medical genetics 2007) 41

Products for TOMM22P6 Gene

Sources for TOMM22P6 Gene