Aliases for TNRC6C-AS1 Gene

Data sources for TNRC6C-AS1 Gene:

Subcategory (RNA class) for TNRC6C-AS1 Gene

lncRNA

Aliases for TNRC6C-AS1 Gene

Previous GeneCards Identifiers for TNRC6C-AS1 Gene

  • GC17M076105

No data available for External Ids for TNRC6C-AS1 Gene

Summaries for TNRC6C-AS1 Gene

GeneCards Summary for TNRC6C-AS1 Gene

TNRC6C-AS1 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for TNRC6C-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for TNRC6C-AS1 Gene

Genomics for TNRC6C-AS1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for TNRC6C-AS1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around TNRC6C-AS1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for TNRC6C-AS1 Gene

Latest Assembly
chr17:78,107,397-78,111,799
(GRCh38/hg38)
Size:
4,403 bases
Orientation:
Minus strand

Genomic View for TNRC6C-AS1 Gene

Genes around TNRC6C-AS1 on UCSC Golden Path with GeneCards custom track
TNRC6C-AS1 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

TNRC6C-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TNRC6C-AS1 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for TNRC6C-AS1 Gene

Proteins for TNRC6C-AS1 Gene

Post-translational modifications for TNRC6C-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TNRC6C-AS1 Gene

Domains & Families for TNRC6C-AS1 Gene

Gene Families for TNRC6C-AS1 Gene

genes like me logo Genes that share domains with TNRC6C-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for TNRC6C-AS1 Gene

Function for TNRC6C-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TNRC6C-AS1 Gene

Localization for TNRC6C-AS1 Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for TNRC6C-AS1 gene
Compartment Confidence
extracellular 1
nucleus 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TNRC6C-AS1 Gene

Pathways & Interactions for TNRC6C-AS1 Gene

PathCards logo

SuperPathways for TNRC6C-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for TNRC6C-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for TNRC6C-AS1 Gene

Drugs & Compounds for TNRC6C-AS1 Gene

No Compound Related Data Available

Transcripts for TNRC6C-AS1 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for TNRC6C-AS1 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00008B9640_9606 lncRNA 3194 2

LNCipedia: TNRC6C-AS1:1,

NONCODE: NONHSAT056185.2,

URS00008B31C8_9606 lncRNA 3190 2

LncBook: HSALNT0245777,

LNCipedia: TNRC6C-AS1:2,

URS00008B5F86_9606 lncRNA 2939 2

LNCipedia: TNRC6C-AS1:3,

NONCODE: NONHSAT056184.2,

URS0000759BA6_9606 lncRNA 3189 1

LNCipedia: TNRC6C-AS1:5,

URS0001BF947A_9606 lncRNA 3188 1

LncBook: HSALNT0245777,

TNRC6C-AS1 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for TNRC6C-AS1 Gene

No ASD Table

Relevant External Links for TNRC6C-AS1 Gene

GeneLoc Exon Structure for
TNRC6C-AS1

No data available for mRNA/cDNA for TNRC6C-AS1 Gene

Expression for TNRC6C-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for TNRC6C-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for TNRC6C-AS1 Gene

This gene is overexpressed in Spleen (x5.6), Brain - Spinal cord (cervical c-1) (x4.2), and Whole Blood (x4.1).

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for TNRC6C-AS1

genes like me logo Genes that share expression patterns with TNRC6C-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TNRC6C-AS1 Gene

Orthologs for TNRC6C-AS1 Gene

No data available for Orthologs and Evolution for TNRC6C-AS1 Gene

Paralogs for TNRC6C-AS1 Gene

No data available for Paralogs for TNRC6C-AS1 Gene

Variants for TNRC6C-AS1 Gene

Structural Variations from Database of Genomic Variants (DGV) for TNRC6C-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv833554 CNV gain+loss 17160897

SNP Genotyping and Copy Number Assays for research

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Variation tolerance and Additional Variant Information for TNRC6C-AS1 Gene

Disorders for TNRC6C-AS1 Gene

Additional Disease Information for TNRC6C-AS1

No disorders were found for TNRC6C-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TNRC6C-AS1 Gene

Publications for TNRC6C-AS1 Gene

No publications were found for TNRC6C-AS1 Gene.

Products for TNRC6C-AS1 Gene

Sources for TNRC6C-AS1 Gene