Aliases for TMSB4XP8 Gene

Aliases for TMSB4XP8 Gene

  • TMSB4X Pseudogene 8 2 3 5
  • Thymosin Beta 4, X-Linked Pseudogene 8 2 3
  • Thymosin-Like 3 2 3
  • Thymosin Beta-4-Like Protein 3 3
  • TMSB4XP8 5
  • TMSL3 3

External Ids for TMSB4XP8 Gene

Previous HGNC Symbols for TMSB4XP8 Gene

  • TMSL3

Previous GeneCards Identifiers for TMSB4XP8 Gene

  • GC04M091760

Summaries for TMSB4XP8 Gene

GeneCards Summary for TMSB4XP8 Gene

TMSB4XP8 (TMSB4X Pseudogene 8) is a Pseudogene.

Additional gene information for TMSB4XP8 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for TMSB4XP8 Gene

Genomics for TMSB4XP8 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for TMSB4XP8 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J090838 Promoter 0.3 Ensembl 600.7 +0.3 311 0.8 TMSB4XP8 lnc-SNCA-3 piR-51137-087 CCSER1
GH04J090843 Enhancer 0.8 Ensembl 0.7 -4.1 -4088 0.4 GATAD2A BACH1 RXRB IKZF2 TRIM22 CEBPA SOX13 DPF2 RELB FOXA2 TMSB4XP8 lnc-SNCA-3 piR-32023-175 CCSER1
GH04J090840 Enhancer 0.7 Ensembl ENCODE 0.7 -2.6 -2589 1.8 CEBPG CEBPA CEBPB NFIL3 JUN GATA3 HLF TMSB4XP8 lnc-SNCA-3 piR-32023-175 CCSER1
GH04J090833 Enhancer 0.6 Ensembl ENCODE 0.4 +5.3 5260 1.5 NANOG SP1 POU5F1 TMSB4XP8 lnc-SNCA-3 piR-51137-087 CCSER1
GH04J090845 Enhancer 0.5 Ensembl 0.4 -6.7 -6689 0.8 BACH1 NFE2 MAFG NFE2L2 MAFK piR-32023-175 TMSB4XP8 lnc-SNCA-3 CCSER1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around TMSB4XP8 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for TMSB4XP8 Gene

Genomic Locations for TMSB4XP8 Gene
chr4:90,838,496-90,839,112
(GRCh38/hg38)
Size:
617 bases
Orientation:
Minus strand
chr4:91,759,644-91,760,266
(GRCh37/hg19)
Size:
623 bases
Orientation:
Minus strand

Genomic View for TMSB4XP8 Gene

Genes around TMSB4XP8 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TMSB4XP8 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TMSB4XP8 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TMSB4XP8 Gene

Proteins for TMSB4XP8 Gene

Post-translational modifications for TMSB4XP8 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TMSB4XP8 Gene

Domains & Families for TMSB4XP8 Gene

Suggested Antigen Peptide Sequences for TMSB4XP8 Gene

GenScript: Design optimal peptide antigens:
  • Thymosin beta-4-like protein 3 (TMSL3_HUMAN)

No data available for Gene Families , Protein Domains , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for TMSB4XP8 Gene

Function for TMSB4XP8 Gene

Phenotypes From GWAS Catalog for TMSB4XP8 Gene

genes like me logo Genes that share phenotypes with TMSB4XP8: view

Animal Model Products

CRISPR Products

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for TMSB4XP8

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TMSB4XP8 Gene

Localization for TMSB4XP8 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TMSB4XP8 Gene

Pathways & Interactions for TMSB4XP8 Gene

PathCards logo

SuperPathways for TMSB4XP8 Gene

No Data Available

Gene Ontology (GO) - Biological Process for TMSB4XP8 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for TMSB4XP8 Gene

Drugs & Compounds for TMSB4XP8 Gene

No Compound Related Data Available

Transcripts for TMSB4XP8 Gene

mRNA/cDNA for TMSB4XP8 Gene

1 REFSEQ mRNAs :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for TMSB4XP8

Alternative Splicing Database (ASD) splice patterns (SP) for TMSB4XP8 Gene

No ASD Table

Relevant External Links for TMSB4XP8 Gene

GeneLoc Exon Structure for
TMSB4XP8

Expression for TMSB4XP8 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for TMSB4XP8 Gene

mRNA differential expression in normal tissues according to GTEx for TMSB4XP8 Gene

This gene is overexpressed in Whole Blood (x4.9).

Protein differential expression in normal tissues from HIPED for TMSB4XP8 Gene

This gene is overexpressed in Urine (57.7) and Skin (6.3).

Integrated Proteomics: protein expression in normal tissues and cell lines from MOPED for TMSB4XP8 Gene



Protein tissue co-expression partners for TMSB4XP8 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for TMSB4XP8

genes like me logo Genes that share expression patterns with TMSB4XP8: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TMSB4XP8 Gene

Orthologs for TMSB4XP8 Gene

This gene was present in the common ancestor of chordates.

Orthologs for TMSB4XP8 Gene

Organism Taxonomy Gene Similarity Type Details
Tropical Clawed Frog
(Silurana tropicalis)
Amphibia Str.8129 30
Species where no ortholog for TMSB4XP8 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Eremothecium gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • Alpha proteobacteria (Wolbachia pipientis)
  • Amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • Baker's yeast (Saccharomyces cerevisiae)
  • Barley (Hordeum vulgare)
  • Beta proteobacteria (Neisseria meningitidis)
  • Bread mold (Neurospora crassa)
  • Chicken (Gallus gallus)
  • Chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • Common water flea (Daphnia pulex)
  • Corn (Zea mays)
  • Cow (Bos Taurus)
  • Dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • Filamentous fungi (Aspergillus nidulans)
  • Firmicute Bacteria (Streptococcus pneumoniae)
  • Fission Yeast (Schizosaccharomyces pombe)
  • Fruit Fly (Drosophila melanogaster)
  • Green Algae (Chlamydomonas reinhardtii)
  • Honey Bee (Apis mellifera)
  • K. Lactis Yeast (Kluyveromyces lactis)
  • Lizard (Anolis carolinensis)
  • Loblloly Pine (Pinus taeda)
  • Malaria Parasite (Plasmodium falciparum)
  • Medicago Trunc (Medicago Truncatula)
  • Moss (Physcomitrella patens)
  • Mouse (Mus musculus)
  • Oppossum (Monodelphis domestica)
  • Orangutan (Pongo pygmaeus)
  • Pig (Sus scrofa)
  • Platypus (Ornithorhynchus anatinus)
  • Rainbow Trout (Oncorhynchus mykiss)
  • Rat (Rattus norvegicus)
  • Rice (Oryza sativa)
  • Rice Blast Fungus (Magnaporthe grisea)
  • Schistosome Parasite (Schistosoma mansoni)
  • Sea Anemone (Nematostella vectensis)
  • Sea Vase (Ciona intestinalis)
  • Sea Squirt (Ciona savignyi)
  • Sea Urchin (Strongylocentrotus purpuratus)
  • Sorghum (Sorghum bicolor)
  • Soybean (Glycine max)
  • Stem Rust Fungus (Puccinia graminis)
  • Sugarcane (Saccharum officinarum)
  • Thale Cress (Arabidopsis thaliana)
  • Tomato (Lycopersicon esculentum)
  • Toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • Wheat (Triticum aestivum)
  • Worm (Caenorhabditis elegans)
  • Zebrafish (Danio rerio)

Evolution for TMSB4XP8 Gene

ENSEMBL:
Gene Tree for TMSB4XP8 (if available)
TreeFam:
Gene Tree for TMSB4XP8 (if available)

Paralogs for TMSB4XP8 Gene

No data available for Paralogs for TMSB4XP8 Gene

Variants for TMSB4XP8 Gene

Additional Variant Information for TMSB4XP8 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TMSB4XP8

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TMSB4XP8 Gene

Disorders for TMSB4XP8 Gene

No disorders were found for TMSB4XP8 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TMSB4XP8 Gene

Publications for TMSB4XP8 Gene

  1. Human thymosin-beta 4/6-26 gene is part of a multigene family composed of seven members located on seven different chromosomes. (PMID: 2004759) Clauss IM … Huez GA (Genomics 1991) 2 3
  2. Isobaric labeling and tandem mass spectrometry: a novel approach for profiling and quantifying proteins differentially expressed in amniotic fluid in preterm labor with and without intra-amniotic infection/inflammation. (PMID: 19670042) Romero R … Rogers WT (The journal of maternal-fetal & neonatal medicine : the official journal of the European Association of Perinatal Medicine, the Federation of Asia and Oceania Perinatal Societies, the International Society of Perinatal Obstetricians 2010) 23
  3. Ubiquitin-mediated proteolysis of HuR by heat shock. (PMID: 19322201) Abdelmohsen K … Gorospe M (The EMBO journal 2009) 3

Products for TMSB4XP8 Gene

Sources for TMSB4XP8 Gene