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TMSB4XP8 Gene(Pseudogene)

Thymosin Beta 4, X-Linked Pseudogene 8

GCID:
GC04M090838
GIFtS:
18
Genes Participants
UDN Logo

Aliases for TMSB4XP8 Gene

Aliases for TMSB4XP8 Gene

  • Thymosin Beta 4, X-Linked Pseudogene 8 2 3 5
  • Thymosin-Like 3 2 3
  • Thymosin Beta-4-Like Protein 3 3
  • TMSL3 3

External Ids for TMSB4XP8 Gene

Previous HGNC Symbols for TMSB4XP8 Gene

  • TMSL3

Previous GeneCards Identifiers for TMSB4XP8 Gene

  • GC04M091760

Summaries for TMSB4XP8 Gene

GeneCards Summary for TMSB4XP8 Gene

TMSB4XP8 (Thymosin Beta 4, X-Linked Pseudogene 8) is a Pseudogene.

Additional gene information for TMSB4XP8 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TMSB4XP8 Gene

Genomics for TMSB4XP8 Gene

Products:

  1. Regulatory Element

GeneHancer (GH) Regulatory Elements for TMSB4XP8 Gene

Promoters and enhancers for TMSB4XP8 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH04I090838 Promoter 1 EPDnew Ensembl 550.8 +0.3 314 0.8 TMSB4XP8 GC04P090718 CCSER1
GH04I090840 Enhancer 0.5 ENCODE 550.8 -1.9 -1930 0.2 NFIL3 GATA3 HLF CEBPA CEBPB CEBPG TMSB4XP8 PIR41085 CCSER1
GH04I090833 Enhancer 0.4 ENCODE 0.4 +5.3 5314 1.4 SP1 POU5F1 TMSB4XP8 GC04P090718 CCSER1
GH04I091064 Enhancer 1.1 Ensembl ENCODE 0.1 -225.6 -225560 1.3 PKNOX1 FEZF1 ZNF2 ZNF213 ZNF302 TSHZ1 ZNF488 MAFF ZNF610 ZSCAN16 PIR41085 TMSB4XP8 CCSER1
GH04I090949 Enhancer 1 Ensembl ENCODE 0.1 -112.0 -112047 2.9 ZSCAN4 FEZF1 BRCA1 ZNF335 RCOR1 FOS ZNF362 CEBPB ZNF843 SP1 TMSB4XP8 PIR41085 CCSER1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around TMSB4XP8 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TMSB4XP8 Gene

Genomic Locations for TMSB4XP8 Gene
chr4:90,838,485-90,839,115
(GRCh38/hg38)
Size:
631 bases
Orientation:
Minus strand
chr4:91,759,644-91,760,266
(GRCh37/hg19)

Genomic View for TMSB4XP8 Gene

Genes around TMSB4XP8 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TMSB4XP8 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TMSB4XP8 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for TMSB4XP8 Gene

Proteins for TMSB4XP8 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Protein Expression for TMSB4XP8 Gene

See protein expression from ProteomicsDB, MOPED, PaxDb, and MaxQB

Post-translational modifications for TMSB4XP8 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TMSB4XP8 Gene

Domains & Families for TMSB4XP8 Gene

Suggested Antigen Peptide Sequences for TMSB4XP8 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for TMSB4XP8 Gene

Function for TMSB4XP8 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for TMSB4XP8 Gene

Phenotypes for TMSB4XP8 Gene

GenomeRNAi human phenotypes for TMSB4XP8:
genes like me logo Genes that share phenotypes with TMSB4XP8: view

Animal Model Products

Inhibitory RNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TMSB4XP8 Gene

Localization for TMSB4XP8 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TMSB4XP8 Gene

Pathways & Interactions for TMSB4XP8 Gene

SuperPathways for TMSB4XP8 Gene

PathCards logo More details on SuperPathways for TMSB4XP8
No Data Available

Interacting Proteins for TMSB4XP8 Gene

Gene Ontology (GO) - Biological Process for TMSB4XP8 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TMSB4XP8 Gene

Drugs & Compounds for TMSB4XP8 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for TMSB4XP8 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for TMSB4XP8 Gene

(1) REFSEQ mRNAs :
(380) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Inhibitory RNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TMSB4XP8 Gene

No ASD Table

Relevant External Links for TMSB4XP8 Gene

GeneLoc Exon Structure for
TMSB4XP8
ECgene alternative splicing isoforms for
TMSB4XP8

Expression for TMSB4XP8 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TMSB4XP8 Gene

mRNA expression in normal human tissues for TMSB4XP8 Gene
mRNA expression by GTEx for TMSB4XP8 Gene

mRNA differential expression in normal tissues according to GTEx for TMSB4XP8 Gene

This gene is overexpressed in Whole Blood (x4.9).

Protein differential expression in normal tissues from HIPED for TMSB4XP8 Gene

This gene is overexpressed in Urine (57.7) and Skin (6.3).

Integrated Proteomics: protein expression in normal tissues and cell lines from MOPED for TMSB4XP8 Gene



Protein tissue co-expression partners for TMSB4XP8 Gene

NURSA nuclear receptor signaling pathways regulating expression of TMSB4XP8 Gene:

TMSB4XP8
genes like me logo Genes that share expression patterns with TMSB4XP8: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TMSB4XP8 Gene

Orthologs for TMSB4XP8 Gene

This gene was present in the common ancestor of chordates.

Orthologs for TMSB4XP8 Gene

Organism Taxonomy Gene Similarity Type Details
tropical clawed frog
(Silurana tropicalis)
 Amphibia Str.8129 33
Species where no ortholog for TMSB4XP8 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for TMSB4XP8 Gene

ENSEMBL:
Gene Tree for TMSB4XP8 (if available)
TreeFam:
Gene Tree for TMSB4XP8 (if available)

Paralogs for TMSB4XP8 Gene

No data available for Paralogs for TMSB4XP8 Gene

Variants for TMSB4XP8 Gene

Additional Variant Information for TMSB4XP8 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TMSB4XP8

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TMSB4XP8 Gene

Disorders for TMSB4XP8 Gene

No disorders were found for TMSB4XP8 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TMSB4XP8 Gene

Publications for TMSB4XP8 Gene

  1. Human thymosin-beta 4/6-26 gene is part of a multigene family composed of seven members located on seven different chromosomes. (PMID: 2004759) Clauss IM … Huez GA (Genomics 1991) 2 3 58
  2. Isobaric labeling and tandem mass spectrometry: a novel approach for profiling and quantifying proteins differentially expressed in amniotic fluid in preterm labor with and without intra-amniotic infection/inflammation. (PMID: 19670042) Romero R … Rogers WT (The journal of maternal-fetal & neonatal medicine : the official journal of the European Association of Perinatal Medicine, the Federation of Asia and Oceania Perinatal Societies, the International Society of Perinatal Obstetricians 2010) 22 58
  3. Ubiquitin-mediated proteolysis of HuR by heat shock. (PMID: 19322201) Abdelmohsen K … Gorospe M (The EMBO journal 2009) 3 58

Products for TMSB4XP8 Gene

Sources for TMSB4XP8 Gene

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