Aliases for TMSB4XP6 Gene

Aliases for TMSB4XP6 Gene

  • TMSB4X Pseudogene 6 2 3 5
  • Thymosin Beta 4, X-Linked Pseudogene 6 2 3
  • Thymosin-Like 6 (Pseudogene) 2 3
  • Thymosin, Beta 4-Like 2
  • Thymosin-Like 6 2
  • TMSB4L 3
  • TMSL6 3

External Ids for TMSB4XP6 Gene

Previous HGNC Symbols for TMSB4XP6 Gene

  • TMSB4L
  • TMSL6

Previous GeneCards Identifiers for TMSB4XP6 Gene

  • GC20M049457

Summaries for TMSB4XP6 Gene

GeneCards Summary for TMSB4XP6 Gene

TMSB4XP6 (TMSB4X Pseudogene 6) is a Pseudogene.

Additional gene information for TMSB4XP6 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for TMSB4XP6 Gene

Genomics for TMSB4XP6 Gene

GeneHancer (GH) Regulatory Elements for TMSB4XP6 Gene

Promoters and enhancers for TMSB4XP6 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH20J050840 Promoter 0.3 Ensembl 500.7 +0.3 326 0.6 TMSB4XP6 lnc-ADNP-1 NONHSAG032017.2 BCAS4
GH20J050836 Enhancer 1.3 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.7 +2.3 2309 3.1 ZBTB11 MYC POLR2A BCL11A TCF12 ZNF316 ZBTB17 CBFB MAFF IRF1 BCAS4 TMSB4XP6 lnc-ADNP-1 NONHSAG032017.2
GH20J050843 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.7 -3.9 -3920 3.3 SIN3A SP1 JUND FOS ZNF639 EP300 ZIC2 RELA MEF2C RCOR1 BCAS4 ADNP DPM1 TMSB4XP6 NONHSAG032017.2 piR-38461
GH20J050848 Enhancer 1 ENCODE CraniofacialAtlas 0.4 -9.4 -9353 4.2 SP1 ZIC2 BCL11A TCF12 CBFB CTCF SMARCC1 ZKSCAN1 E4F1 POLR2A BCAS4 ADNP TMSB4XP6 piR-38461 NONHSAG032017.2
GH20J050855 Enhancer 1.1 Ensembl ENCODE 0.4 -15.1 -15081 2.2 ZNF217 NCOR1 TEAD4 ZNF10 ZIC2 KDM6A ZBTB10 CUX1 TGIF2 SKI ADNP PSMD10P1 ENSG00000232043 PTPN1 DPM1 TMSB4XP6 piR-38461 BCAS4 NONHSAG032017.2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around TMSB4XP6 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TMSB4XP6 Gene

Genomic Locations for TMSB4XP6 Gene
chr20:50,840,211-50,840,827
(GRCh38/hg38)
Size:
617 bases
Orientation:
Minus strand
chr20:49,456,749-49,457,364
(GRCh37/hg19)
Size:
616 bases
Orientation:
Minus strand

Genomic View for TMSB4XP6 Gene

Genes around TMSB4XP6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TMSB4XP6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TMSB4XP6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TMSB4XP6 Gene

Proteins for TMSB4XP6 Gene

Post-translational modifications for TMSB4XP6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TMSB4XP6 Gene

Domains & Families for TMSB4XP6 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for TMSB4XP6 Gene

Function for TMSB4XP6 Gene

Phenotypes From GWAS Catalog for TMSB4XP6 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TMSB4XP6 Gene

Localization for TMSB4XP6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TMSB4XP6 Gene

Pathways & Interactions for TMSB4XP6 Gene

PathCards logo

SuperPathways for TMSB4XP6 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for TMSB4XP6 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for TMSB4XP6 Gene

Drugs & Compounds for TMSB4XP6 Gene

No Compound Related Data Available

Transcripts for TMSB4XP6 Gene

mRNA/cDNA for TMSB4XP6 Gene

1 NCBI additional mRNA sequence :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for TMSB4XP6 Gene

No ASD Table

Relevant External Links for TMSB4XP6 Gene

GeneLoc Exon Structure for
TMSB4XP6

Expression for TMSB4XP6 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for TMSB4XP6 Gene

mRNA differential expression in normal tissues according to GTEx for TMSB4XP6 Gene

This gene is overexpressed in Whole Blood (x4.5).
genes like me logo Genes that share expression patterns with TMSB4XP6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TMSB4XP6 Gene

Orthologs for TMSB4XP6 Gene

Evolution for TMSB4XP6 Gene

ENSEMBL:
Gene Tree for TMSB4XP6 (if available)
TreeFam:
Gene Tree for TMSB4XP6 (if available)

No data available for Orthologs for TMSB4XP6 Gene

Paralogs for TMSB4XP6 Gene

No data available for Paralogs for TMSB4XP6 Gene

Variants for TMSB4XP6 Gene

Additional Variant Information for TMSB4XP6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TMSB4XP6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TMSB4XP6 Gene

Disorders for TMSB4XP6 Gene

Additional Disease Information for TMSB4XP6

No disorders were found for TMSB4XP6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TMSB4XP6 Gene

Publications for TMSB4XP6 Gene

  1. Human thymosin-beta 4/6-26 gene is part of a multigene family composed of seven members located on seven different chromosomes. (PMID: 2004759) Clauss IM … Huez GA (Genomics 1991) 2 3 54
  2. A proteome-scale map of the human interactome network. (PMID: 25416956) Rolland T … Vidal M (Cell 2014) 3 54
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 54
  4. Interaction of G-actin with thymosin beta 4 and its variants thymosin beta 9 and thymosin beta met9. (PMID: 7929793) Jean C … Pantaloni D (Journal of muscle research and cell motility 1994) 23 54

Products for TMSB4XP6 Gene

Sources for TMSB4XP6 Gene