Aliases for TMPOP2 Gene

Aliases for TMPOP2 Gene

  • Thymopoietin Pseudogene 2 2 3 5
  • EZH2-Binding LncRNA In Cervical Cancer 2 3
  • Thymopoietin Pseudogene 2 (Functional) 2 3
  • LncRNA-EBIC 2 3
  • TMPOP2 5

External Ids for TMPOP2 Gene

Summaries for TMPOP2 Gene

GeneCards Summary for TMPOP2 Gene

TMPOP2 (Thymopoietin Pseudogene 2) is a Pseudogene. Diseases associated with TMPOP2 include Cervical Cancer.

Additional gene information for TMPOP2 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for TMPOP2 Gene

Genomics for TMPOP2 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for TMPOP2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J074665 Promoter/Enhancer 2.3 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas 600.7 -0.7 -704 3.2 SP1 HNRNPL CREB1 GATAD2A ZNF629 ZNF512 POLR2A BACH1 FOS LARP7 RFWD3 TMPOP2 lnc-MLKL-3 lnc-NPIPB15-6 ENSG00000214331 ADAT1 KARS1 ENSG00000261079 GLG1 NPIPB15
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around TMPOP2 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for TMPOP2 Gene

Genomic Locations for TMPOP2 Gene
chr16:74,667,504-74,668,903
(GRCh38/hg38)
Size:
1,400 bases
Orientation:
Plus strand
chr16:74,701,404-74,702,604
(GRCh37/hg19)
Size:
1,201 bases
Orientation:
Plus strand

Genomic View for TMPOP2 Gene

Genes around TMPOP2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TMPOP2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TMPOP2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TMPOP2 Gene

Proteins for TMPOP2 Gene

Post-translational modifications for TMPOP2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TMPOP2 Gene

Domains & Families for TMPOP2 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for TMPOP2 Gene

Function for TMPOP2 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TMPOP2 Gene

Localization for TMPOP2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TMPOP2 Gene

Pathways & Interactions for TMPOP2 Gene

PathCards logo

SuperPathways for TMPOP2 Gene

No Data Available

Gene Ontology (GO) - Biological Process for TMPOP2 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for TMPOP2 Gene

Drugs & Compounds for TMPOP2 Gene

No Compound Related Data Available

Transcripts for TMPOP2 Gene

mRNA/cDNA for TMPOP2 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TMPOP2 Gene

No ASD Table

Relevant External Links for TMPOP2 Gene

GeneLoc Exon Structure for
TMPOP2

Expression for TMPOP2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for TMPOP2 Gene

genes like me logo Genes that share expression patterns with TMPOP2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TMPOP2 Gene

Orthologs for TMPOP2 Gene

Evolution for TMPOP2 Gene

ENSEMBL:
Gene Tree for TMPOP2 (if available)
TreeFam:
Gene Tree for TMPOP2 (if available)

No data available for Orthologs for TMPOP2 Gene

Paralogs for TMPOP2 Gene

No data available for Paralogs for TMPOP2 Gene

Variants for TMPOP2 Gene

Additional Variant Information for TMPOP2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TMPOP2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TMPOP2 Gene

Disorders for TMPOP2 Gene

MalaCards: The human disease database

(1) MalaCards diseases for TMPOP2 Gene - From: LncRNADisease and GeneCards

Disorder Aliases PubMed IDs
cervical cancer
  • cervical cancer, somatic
- elite association - COSMIC cancer census association via MalaCards

Additional Disease Information for TMPOP2

genes like me logo Genes that share disorders with TMPOP2: view

No data available for UniProtKB/Swiss-Prot and Genatlas for TMPOP2 Gene

Publications for TMPOP2 Gene

  1. Long noncoding RNA-EBIC promotes tumor cell invasion by binding to EZH2 and repressing E-cadherin in cervical cancer. (PMID: 25007342) Sun NX … Li W (PloS one 2014) 2 3
  2. LncRNA EBIC promoted proliferation, metastasis and cisplatin resistance of ovarian cancer cells and predicted poor survival in ovarian cancer patients. (PMID: 30058681) Xu QF … Wang X (European review for medical and pharmacological sciences 2018) 3

Products for TMPOP2 Gene

Sources for TMPOP2 Gene