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Aliases for TMF1P1 Gene
External Ids for TMF1P1 Gene
- HGNC: 51353
- Entrez Gene: 106480320
- Ensembl: ENSG00000262235
Summaries for TMF1P1 Gene
GeneCards Summary for TMF1P1 Gene
TMF1P1 (TATA Element Modulatory Factor 1 Pseudogene 1) is a Pseudogene.
Additional gene information for TMF1P1 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for TMF1P1 Gene
Genomics for TMF1P1 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for TMF1P1 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH16J013463 | Enhancer | 0.6 | FANTOM5 | 0.4 | +5.4 | 5391 | 0.5 | FOXA2 YY1 GABPA ZBTB33 JUND RAD21 HNF4A RXRA MAX FOXA1 | TMF1P1 piR-61840-002 ENSG00000262801 ERCC4 SHISA9 | |
| GH16J013521 | Enhancer | 0.6 | Ensembl ENCODE | 0.2 | +63.6 | 63575 | 2.2 | ATF7 SPI1 CEBPB | piR-61840-002 TMF1P1 ENSG00000262801 ERCC4 SHISA9 | |
| GH16J013528 | Enhancer | 0.6 | Ensembl ENCODE | 0.2 | +70.9 | 70898 | 1.7 | ZNF316 MAFF USF1 MAFK SPI1 | piR-61840-002 TMF1P1 ENSG00000262801 ERCC4 SHISA9 | |
| GH16J013480 | Enhancer | 0.3 | Ensembl | 0.4 | +22.4 | 22375 | 0.6 | CREB1 | TMF1P1 piR-61840-002 ENSG00000262801 ERCC4 SHISA9 | |
| GH16J013506 | Enhancer | 0.2 | Ensembl | 0.3 | +48.0 | 47975 | 0.2 | piR-61840-002 TMF1P1 ENSG00000262801 ERCC4 SHISA9 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around TMF1P1 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for TMF1P1 Gene
Genomic Locations for TMF1P1 Gene
- chr16:13,458,326-13,458,833
- (GRCh38/hg38)
- Size:
- 508 bases
- Orientation:
- Plus strand
- chr16:13,552,183-13,552,555
- (GRCh37/hg19)
- Size:
- 373 bases
- Orientation:
- Plus strand
Genomic View for TMF1P1 Gene
Genes around TMF1P1 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 16p13.12 by HGNC
- 16p13.12 by Entrez Gene
- 16p13.12 by Ensembl
TMF1P1 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for TMF1P1 Gene
Proteins for TMF1P1 Gene
Post-translational modifications for TMF1P1 Gene
No Post-translational modifications
Antibody Products
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for TMF1P1
- Origene Custom Protein Services for TMF1P1
No data available for DME Specific Peptides for TMF1P1 Gene
Domains & Families for TMF1P1 Gene
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for TMF1P1 Gene
Function for TMF1P1 Gene
Phenotypes From GWAS Catalog for TMF1P1 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
miRNA Products
Inhibitory RNA Products
Clone Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TMF1P1 Gene
Localization for TMF1P1 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TMF1P1 Gene
Transcripts for TMF1P1 Gene
mRNA/cDNA for TMF1P1 Gene
- 1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000576058 373 nts (view in UCSC)
CRISPR Products
- Browse CRISPR knockouts for TMF1P1
miRNA Products
Inhibitory RNA Products
Clone Products
Relevant External Links for TMF1P1 Gene
- GeneLoc Exon Structure for
- TMF1P1
Expression for TMF1P1 Gene
Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TMF1P1 Gene
Orthologs for TMF1P1 Gene
No data available for Orthologs for TMF1P1 Gene
Paralogs for TMF1P1 Gene
No data available for Paralogs for TMF1P1 Gene
Variants for TMF1P1 Gene
Additional Variant Information for TMF1P1 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- TMF1P1
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TMF1P1 Gene
Disorders for TMF1P1 Gene
No disorders were found for TMF1P1 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TMF1P1 Gene
Publications for TMF1P1 Gene
No publications were found for TMF1P1 Gene.
No data available for Mastermind for TMF1P1 Gene
Products for TMF1P1 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for TMF1P1
- Origene Custom Protein Services for TMF1P1
- Browse OriGene Inhibitory RNA Products For TMF1P1
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for TMF1P1
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For TMF1P1
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for TMF1P1
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for TMF1P1
- Search GeneCopoeia for miRNA 3'UTR Target clone products for TMF1P1
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for TMF1P1
Sources for TMF1P1 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) Genetics Home Reference
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNACentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Signalway Antibody
- (175) Open Targets Platform
- (176) 5SRRNADB
- (177) snoDB
- (178) MirGeneDB