Aliases for TMF1P1 Gene

Aliases for TMF1P1 Gene

  • TATA Element Modulatory Factor 1 Pseudogene 1 2 3 5

External Ids for TMF1P1 Gene

Summaries for TMF1P1 Gene

GeneCards Summary for TMF1P1 Gene

TMF1P1 (TATA Element Modulatory Factor 1 Pseudogene 1) is a Pseudogene.

Additional gene information for TMF1P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for TMF1P1 Gene

Genomics for TMF1P1 Gene

GeneHancer (GH) Regulatory Elements for TMF1P1 Gene

Promoters and enhancers for TMF1P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J013463 Enhancer 0.6 FANTOM5 0.4 +5.4 5391 0.5 FOXA2 ZBTB33 JUND RAD21 RXRA MAX HNF4A FOXA1 EGR1 ATF3 TMF1P1 piR-61840-002 ENSG00000262801 SHISA9
GH16J013528 Enhancer 0.6 Ensembl ENCODE 0.2 +70.9 70898 1.7 USF1 ZNF316 MAFF MAFK SPI1 piR-61840-002 TMF1P1 ENSG00000262801 SHISA9
GH16J013521 Enhancer 0.6 Ensembl ENCODE 0.2 +63.6 63575 2.2 SPI1 CEBPB ATF7 piR-61840-002 TMF1P1 ENSG00000262801 SHISA9
GH16J013480 Enhancer 0.3 Ensembl 0.4 +22.4 22375 0.6 CREB1 TMF1P1 piR-61840-002 ENSG00000262801 SHISA9
GH16J013506 Enhancer 0.2 Ensembl 0.3 +48.0 47975 0.2 piR-61840-002 TMF1P1 ENSG00000262801 SHISA9
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around TMF1P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TMF1P1 Gene

Genomic Locations for TMF1P1 Gene
chr16:13,458,326-13,458,698
(GRCh38/hg38)
Size:
373 bases
Orientation:
Plus strand
chr16:13,552,183-13,552,555
(GRCh37/hg19)
Size:
373 bases
Orientation:
Plus strand

Genomic View for TMF1P1 Gene

Genes around TMF1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TMF1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TMF1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TMF1P1 Gene

Proteins for TMF1P1 Gene

Post-translational modifications for TMF1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TMF1P1 Gene

Domains & Families for TMF1P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for TMF1P1 Gene

Function for TMF1P1 Gene

Phenotypes From GWAS Catalog for TMF1P1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TMF1P1 Gene

Localization for TMF1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TMF1P1 Gene

Pathways & Interactions for TMF1P1 Gene

PathCards logo

SuperPathways for TMF1P1 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for TMF1P1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for TMF1P1 Gene

Drugs & Compounds for TMF1P1 Gene

No Compound Related Data Available

Transcripts for TMF1P1 Gene

mRNA/cDNA for TMF1P1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TMF1P1 Gene

No ASD Table

Relevant External Links for TMF1P1 Gene

GeneLoc Exon Structure for
TMF1P1

Expression for TMF1P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for TMF1P1 Gene

genes like me logo Genes that share expression patterns with TMF1P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TMF1P1 Gene

Orthologs for TMF1P1 Gene

Evolution for TMF1P1 Gene

ENSEMBL:
Gene Tree for TMF1P1 (if available)
TreeFam:
Gene Tree for TMF1P1 (if available)

No data available for Orthologs for TMF1P1 Gene

Paralogs for TMF1P1 Gene

No data available for Paralogs for TMF1P1 Gene

Variants for TMF1P1 Gene

Additional Variant Information for TMF1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TMF1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TMF1P1 Gene

Disorders for TMF1P1 Gene

No disorders were found for TMF1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TMF1P1 Gene

Publications for TMF1P1 Gene

No publications were found for TMF1P1 Gene.

No data available for Mastermind for TMF1P1 Gene

Products for TMF1P1 Gene

Sources for TMF1P1 Gene