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Aliases for TMEM97P1 Gene

Subcategory (RNA class) for TMEM97P1 Gene

lncRNA

Aliases for TMEM97P1 Gene

  • Transmembrane Protein 97 Pseudogene 1 2 3 5

External Ids for TMEM97P1 Gene

ORGUL Members for TMEM97P1 Gene

Previous GeneCards Identifiers for TMEM97P1 Gene

  • GC00U931880
  • GC21P045205

Summaries for TMEM97P1 Gene

GeneCards Summary for TMEM97P1 Gene

TMEM97P1 (Transmembrane Protein 97 Pseudogene 1) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for TMEM97P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TMEM97P1 Gene

Genomics for TMEM97P1 Gene

GeneHancer (GH) Regulatory Elements for TMEM97P1 Gene

Promoters and enhancers for TMEM97P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH21I043782 Enhancer 1.4 FANTOM5 ENCODE dbSUPER 550.8 0.0 -9 1.7 FOXA2 MLX ARID4B NEUROD1 DMAP1 ZNF48 YY1 SLC30A9 FOS RXRA TMEM97P1 CSTB RRP1 AATBC LOC105372825
GH21I043784 Enhancer 0.8 dbSUPER 550.8 +1.4 1415 0.6 ATF1 KLF17 ZBTB40 ZNF766 CAVIN1 ZBTB11 HDAC8 ZNF592 MEF2D NR2C1 TMEM97P1 CSTB WDR4 RRP1B U2AF1 RRP1
GH21I043781 Enhancer 0.4 ENCODE dbSUPER 550.8 -1.7 -1664 0.2 TMEM97P1 AATBC LOC105372825
GH21I043974 Enhancer 1.4 Ensembl ENCODE dbSUPER 11.6 +192.4 192400 1 HDGF ATF1 ARNT SIN3A YBX1 GLI4 TCF12 ZNF280A POLR2B CBX5 RRP1B PWP2 U2AF1 TRAPPC10 AATBC SIK1 UBE2G2 RNU6-859P AGPAT3 RRP1
GH21I043839 Enhancer 0.6 ENCODE 12.4 +56.0 56006 0.1 MEIS2 NR2F1 BACH1 ZNF217 BCL11A IKZF1 TARDBP RUNX3 IKZF2 AGPAT3 AATBC RRP1 TMEM97P1 RNU6-859P PDXK GC21M043858 GC21P043803
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around TMEM97P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TMEM97P1 Gene

Genomic Locations for TMEM97P1 Gene
chr21:43,783,079-43,783,573
(GRCh38/hg38)
Size:
495 bases
Orientation:
Plus strand
chr21:45,203,004-45,203,454
(GRCh37/hg19)

Genomic View for TMEM97P1 Gene

Genes around TMEM97P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TMEM97P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TMEM97P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TMEM97P1 Gene

Proteins for TMEM97P1 Gene

Post-translational modifications for TMEM97P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TMEM97P1 Gene

Domains & Families for TMEM97P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TMEM97P1 Gene

Function for TMEM97P1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TMEM97P1 Gene

Localization for TMEM97P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TMEM97P1 Gene

Pathways & Interactions for TMEM97P1 Gene

SuperPathways for TMEM97P1 Gene

No Data Available

Interacting Proteins for TMEM97P1 Gene

Gene Ontology (GO) - Biological Process for TMEM97P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TMEM97P1 Gene

Drugs & Compounds for TMEM97P1 Gene

No Compound Related Data Available

Transcripts for TMEM97P1 Gene

mRNA/cDNA for TMEM97P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TMEM97P1 Gene

No ASD Table

Relevant External Links for TMEM97P1 Gene

GeneLoc Exon Structure for
TMEM97P1
ECgene alternative splicing isoforms for
TMEM97P1

Expression for TMEM97P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TMEM97P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of TMEM97P1 Gene:

TMEM97P1
genes like me logo Genes that share expression patterns with TMEM97P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TMEM97P1 Gene

Orthologs for TMEM97P1 Gene

Evolution for TMEM97P1 Gene

ENSEMBL:
Gene Tree for TMEM97P1 (if available)
TreeFam:
Gene Tree for TMEM97P1 (if available)

No data available for Orthologs for TMEM97P1 Gene

Paralogs for TMEM97P1 Gene

No data available for Paralogs for TMEM97P1 Gene

Variants for TMEM97P1 Gene

Additional Variant Information for TMEM97P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TMEM97P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TMEM97P1 Gene

Disorders for TMEM97P1 Gene

No disorders were found for TMEM97P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TMEM97P1 Gene

Publications for TMEM97P1 Gene

No publications were found for TMEM97P1 Gene.

Products for TMEM97P1 Gene

Sources for TMEM97P1 Gene

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