Aliases for TMEM92-AS1 Gene

Subcategory (RNA class) for TMEM92-AS1 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for TMEM92-AS1 Gene

  • TMEM92 Antisense RNA 1 2 3 5
  • TMEM92-AS1 2 168
  • TCONS_00025237 3
  • LncRNA-508851 3
  • HSALNG0117279 167
  • NONHSAG022177 92
  • RP11-893F2.9 3

External Ids for TMEM92-AS1 Gene

Summaries for TMEM92-AS1 Gene

GeneCards Summary for TMEM92-AS1 Gene

TMEM92-AS1 (TMEM92 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for TMEM92-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for TMEM92-AS1 Gene

Genomics for TMEM92-AS1 Gene

GeneHancer (GH) Regulatory Elements for TMEM92-AS1 Gene

Promoters and enhancers for TMEM92-AS1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around TMEM92-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TMEM92-AS1 Gene

Genomic Locations for TMEM92-AS1 Gene
chr17:50,281,577-50,290,010
(GRCh38/hg38)
Size:
8,434 bases
Orientation:
Minus strand
chr17:48,358,938-48,365,216
(GRCh37/hg19)
Size:
6,279 bases
Orientation:
Minus strand

Genomic View for TMEM92-AS1 Gene

Genes around TMEM92-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TMEM92-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TMEM92-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TMEM92-AS1 Gene

Proteins for TMEM92-AS1 Gene

Post-translational modifications for TMEM92-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TMEM92-AS1 Gene

Domains & Families for TMEM92-AS1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for TMEM92-AS1 Gene

Function for TMEM92-AS1 Gene

Phenotypes From GWAS Catalog for TMEM92-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TMEM92-AS1 Gene

Localization for TMEM92-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TMEM92-AS1 Gene

Pathways & Interactions for TMEM92-AS1 Gene

PathCards logo

SuperPathways for TMEM92-AS1 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for TMEM92-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for TMEM92-AS1 Gene

Drugs & Compounds for TMEM92-AS1 Gene

No Compound Related Data Available

Transcripts for TMEM92-AS1 Gene

mRNA/cDNA for TMEM92-AS1 Gene

9 RNACentral transcripts :
1 REFSEQ mRNAs :
2 NCBI additional mRNA sequence :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
6 NONCODE transcripts :
6 LncBook transcripts :
5 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for TMEM92-AS1 Gene

No ASD Table

Relevant External Links for TMEM92-AS1 Gene

GeneLoc Exon Structure for
TMEM92-AS1

Expression for TMEM92-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for TMEM92-AS1 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for TMEM92-AS1

genes like me logo Genes that share expression patterns with TMEM92-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TMEM92-AS1 Gene

Orthologs for TMEM92-AS1 Gene

Evolution for TMEM92-AS1 Gene

ENSEMBL:
Gene Tree for TMEM92-AS1 (if available)
TreeFam:
Gene Tree for TMEM92-AS1 (if available)

No data available for Orthologs for TMEM92-AS1 Gene

Paralogs for TMEM92-AS1 Gene

No data available for Paralogs for TMEM92-AS1 Gene

Variants for TMEM92-AS1 Gene

Additional dbSNP identifiers (rs#s) for TMEM92-AS1 Gene

Structural Variations from Database of Genomic Variants (DGV) for TMEM92-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv509661 CNV insertion 20534489
nsv833475 CNV loss 17160897

Additional Variant Information for TMEM92-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TMEM92-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for TMEM92-AS1 Gene

Disorders for TMEM92-AS1 Gene

Additional Disease Information for TMEM92-AS1

No disorders were found for TMEM92-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TMEM92-AS1 Gene

Publications for TMEM92-AS1 Gene

  1. A long noncoding RNA activated by TGF-β promotes the invasion-metastasis cascade in hepatocellular carcinoma. (PMID: 24768205) Yuan JH … Sun SH (Cancer cell 2014) 2 3 54
  2. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo MF … Soares MB (Genome research 1996) 3 54

Products for TMEM92-AS1 Gene

Sources for TMEM92-AS1 Gene