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Aliases for TMEM92-AS1 Gene

Subcategory (RNA class) for TMEM92-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for TMEM92-AS1 Gene

  • TMEM92 Antisense RNA 1 2 3 5
  • TCONS_00025237 3
  • LncRNA-508851 3
  • RP11-893F2.9 3

External Ids for TMEM92-AS1 Gene

Summaries for TMEM92-AS1 Gene

GeneCards Summary for TMEM92-AS1 Gene

TMEM92-AS1 (TMEM92 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for TMEM92-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TMEM92-AS1 Gene

Genomics for TMEM92-AS1 Gene

GeneHancer (GH) Regulatory Elements for TMEM92-AS1 Gene

Promoters and enhancers for TMEM92-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J050288 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 650.7 -2.0 -1966 3.5 BATF BRCA1 RAD21 RFX5 ZNF335 ZNF766 ZNF416 RCOR1 FOS IKZF2 TMEM92-AS1 KAT7 COL1A1 HILS1 ENSG00000253730 SGCA MBTD1 DLX3 ENSG00000248172 PPP1R9B
GH17J050287 Enhancer 0.3 Ensembl 650.7 +0.2 154 0.2 SREBF1 TMEM92-AS1 TMEM92
GH17J050171 Promoter/Enhancer 2.8 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 17.1 +95.3 95333 42 CLOCK DMAP1 YBX1 IRF4 YY1 ZNF213 E2F8 ZNF143 SP3 MEF2D COL1A1 SGCA ENSG00000262837 LUC7L3 FLJ45513 TMEM92-AS1 TMEM92 XYLT2 PPP1R9B ENSG00000253730
GH17J050216 Enhancer 1.3 Ensembl ENCODE dbSUPER 11.9 +68.0 68025 6.9 FOXA2 ARID4B YY1 ZNF614 SCRT2 ATF7 FOS IKZF2 RXRA USF2 TMEM92 TMEM92-AS1 HILS1 ENSG00000253730 SGCA SAMD14 ENSG00000250282 PDK2 ACSF2 CHAD
GH17J050317 Enhancer 1 ENCODE dbSUPER 11.6 -30.9 -30857 2.9 PKNOX1 CLOCK ATF1 SIN3A ZNF766 FOS CAVIN1 ZBTB11 ZNF592 ZNF217 ACSF2 LUC7L3 MBTD1 TMEM92-AS1 XYLT2 COL1A1 TMEM92 ENSG00000262837 ENSG00000253102 ENSG00000250282
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around TMEM92-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TMEM92-AS1 Gene

Genomic Locations for TMEM92-AS1 Gene
6,279 bases
Minus strand
6,279 bases
Minus strand

Genomic View for TMEM92-AS1 Gene

Genes around TMEM92-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TMEM92-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TMEM92-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TMEM92-AS1 Gene

Proteins for TMEM92-AS1 Gene

Post-translational modifications for TMEM92-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TMEM92-AS1 Gene

Domains & Families for TMEM92-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TMEM92-AS1 Gene

Function for TMEM92-AS1 Gene

Phenotypes From GWAS Catalog for TMEM92-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TMEM92-AS1 Gene

Localization for TMEM92-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TMEM92-AS1 Gene

Pathways & Interactions for TMEM92-AS1 Gene

SuperPathways for TMEM92-AS1 Gene

No Data Available

Interacting Proteins for TMEM92-AS1 Gene

Gene Ontology (GO) - Biological Process for TMEM92-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for TMEM92-AS1 Gene

Drugs & Compounds for TMEM92-AS1 Gene

No Compound Related Data Available

Transcripts for TMEM92-AS1 Gene

mRNA/cDNA for TMEM92-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(2) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TMEM92-AS1 Gene

No ASD Table

Relevant External Links for TMEM92-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for TMEM92-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TMEM92-AS1 Gene

genes like me logo Genes that share expression patterns with TMEM92-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TMEM92-AS1 Gene

Orthologs for TMEM92-AS1 Gene

Evolution for TMEM92-AS1 Gene

Gene Tree for TMEM92-AS1 (if available)
Gene Tree for TMEM92-AS1 (if available)

No data available for Orthologs for TMEM92-AS1 Gene

Paralogs for TMEM92-AS1 Gene

No data available for Paralogs for TMEM92-AS1 Gene

Variants for TMEM92-AS1 Gene

Sequence variations from dbSNP and Humsavar for TMEM92-AS1 Gene

SNP ID Clin Chr 17 pos Variation AA Info Type
rs1000015620 -- 50,285,192(-) G/T intron_variant
rs1000525324 -- 50,288,259(-) G/T upstream_transcript_variant
rs1000602942 -- 50,282,812(-) A/T intron_variant
rs1000989827 -- 50,285,444(-) G/A intron_variant
rs1001150147 -- 50,287,999(-) T/G upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for TMEM92-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv509661 CNV insertion 20534489
nsv833475 CNV loss 17160897

Additional Variant Information for TMEM92-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for TMEM92-AS1 Gene

Disorders for TMEM92-AS1 Gene

Additional Disease Information for TMEM92-AS1

No disorders were found for TMEM92-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TMEM92-AS1 Gene

Publications for TMEM92-AS1 Gene

  1. A long noncoding RNA activated by TGF-β promotes the invasion-metastasis cascade in hepatocellular carcinoma. (PMID: 24768205) Yuan JH … Sun SH (Cancer cell 2014) 2 3 58
  2. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo MF … Soares MB (Genome research 1996) 3 58

Products for TMEM92-AS1 Gene

Sources for TMEM92-AS1 Gene

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