Free for academic non-profit institutions. Other users need a Commercial license

Aliases for TMEM212-AS1 Gene

Subcategory (RNA class) for TMEM212-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for TMEM212-AS1 Gene

  • TMEM212 Antisense RNA 1 2 3 5
  • TMEM212 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for TMEM212-AS1 Gene

Previous GeneCards Identifiers for TMEM212-AS1 Gene

  • GC00U933450
  • GC03M171595

Summaries for TMEM212-AS1 Gene

GeneCards Summary for TMEM212-AS1 Gene

TMEM212-AS1 (TMEM212 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for TMEM212-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TMEM212-AS1 Gene

Genomics for TMEM212-AS1 Gene

GeneHancer (GH) Regulatory Elements for TMEM212-AS1 Gene

Promoters and enhancers for TMEM212-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03I171901 Enhancer 0.7 ENCODE 550.8 -1.4 -1356 0.6 HDAC1 SOX13 TFAP4 FOXA2 SAP130 CEBPG ZNF644 GATA3 FOSL2 HOMEZ LOC105374218 TMEM212-AS1 FNDC3B LOC105374217 TMEM212
GH03I171904 Enhancer 0.7 ENCODE 0.8 -4.3 -4328 0.9 ELF3 SOX13 FOXA2 SAP130 RARA GATAD1 NR2F6 HOMEZ MIXL1 GATAD2A PLD1 LOC105374218 TMEM212-AS1 LOC105374217 TMEM212
GH03I171872 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +25.6 25600 5.1 PKNOX1 FOXA2 ZNF48 FOS ATF7 RUNX3 RXRA JUNB SMARCA4 RCOR2 TMEM212 FNDC3B TMEM212-IT1 TMEM212-AS1
GH03I171878 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +21.7 21668 1.4 SOX13 PKNOX1 MAX ZNF644 RAD21 YY1 SCRT2 ZNF143 NR2F6 ATF7 TMEM212 FNDC3B TMEM212-IT1 TMEM212-AS1
GH03I171934 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.3 -35.9 -35856 3.3 HDAC1 TCF12 ZNF766 GATA2 FOS IKZF2 CEBPB NFIC IKZF1 ZNF24 TMEM212 FNDC3B LOC105374217 TMEM212-AS1 LOC105374218
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around TMEM212-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TMEM212-AS1 Gene

Genomic Locations for TMEM212-AS1 Gene
chr3:171,876,352-171,900,740
(GRCh38/hg38)
Size:
24,389 bases
Orientation:
Minus strand
chr3:171,594,142-171,618,530
(GRCh37/hg19)

Genomic View for TMEM212-AS1 Gene

Genes around TMEM212-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TMEM212-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TMEM212-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TMEM212-AS1 Gene

Proteins for TMEM212-AS1 Gene

Post-translational modifications for TMEM212-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TMEM212-AS1 Gene

Domains & Families for TMEM212-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TMEM212-AS1 Gene

Function for TMEM212-AS1 Gene

Phenotypes From GWAS Catalog for TMEM212-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TMEM212-AS1 Gene

Localization for TMEM212-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TMEM212-AS1 Gene

Pathways & Interactions for TMEM212-AS1 Gene

SuperPathways for TMEM212-AS1 Gene

No Data Available

Interacting Proteins for TMEM212-AS1 Gene

Gene Ontology (GO) - Biological Process for TMEM212-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TMEM212-AS1 Gene

Drugs & Compounds for TMEM212-AS1 Gene

No Compound Related Data Available

Transcripts for TMEM212-AS1 Gene

mRNA/cDNA for TMEM212-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TMEM212-AS1 Gene

No ASD Table

Relevant External Links for TMEM212-AS1 Gene

GeneLoc Exon Structure for
TMEM212-AS1
ECgene alternative splicing isoforms for
TMEM212-AS1

Expression for TMEM212-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TMEM212-AS1 Gene

genes like me logo Genes that share expression patterns with TMEM212-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TMEM212-AS1 Gene

Orthologs for TMEM212-AS1 Gene

Evolution for TMEM212-AS1 Gene

ENSEMBL:
Gene Tree for TMEM212-AS1 (if available)
TreeFam:
Gene Tree for TMEM212-AS1 (if available)

No data available for Orthologs for TMEM212-AS1 Gene

Paralogs for TMEM212-AS1 Gene

No data available for Paralogs for TMEM212-AS1 Gene

Variants for TMEM212-AS1 Gene

Sequence variations from dbSNP and Humsavar for TMEM212-AS1 Gene

SNP ID Clin Chr 03 pos Variation AA Info Type
rs1000363708 -- 171,890,090(-) A/G intron_variant
rs1000375693 -- 171,884,060(-) T/C intron_variant
rs1000411633 -- 171,899,598(-) T/C intron_variant
rs1000478413 -- 171,889,791(-) C/T intron_variant
rs1000532429 -- 171,893,200(-) C/G intron_variant

Structural Variations from Database of Genomic Variants (DGV) for TMEM212-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv518951 CNV loss 19592680
nsv7356 OTHER inversion 18451855

Additional Variant Information for TMEM212-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TMEM212-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for TMEM212-AS1 Gene

Disorders for TMEM212-AS1 Gene

Additional Disease Information for TMEM212-AS1

No disorders were found for TMEM212-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TMEM212-AS1 Gene

Publications for TMEM212-AS1 Gene

No publications were found for TMEM212-AS1 Gene.

Products for TMEM212-AS1 Gene

Sources for TMEM212-AS1 Gene

Content
Loading form....