Aliases for TMEM198B Gene

Aliases for TMEM198B Gene

  • Transmembrane Protein 198B (Pseudogene) 2 3 5
  • Transmembrane Protein 198, Pseudogene 2 3
  • 1110012D08Rik Pseudogene 3
  • TMEM198B 5

External Ids for TMEM198B Gene

Previous GeneCards Identifiers for TMEM198B Gene

  • GC12P056235

Summaries for TMEM198B Gene

GeneCards Summary for TMEM198B Gene

TMEM198B (Transmembrane Protein 198B (Pseudogene)) is a Pseudogene.

Additional gene information for TMEM198B Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for TMEM198B Gene

Genomics for TMEM198B Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for TMEM198B Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around TMEM198B on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for TMEM198B Gene

Genomic Locations for TMEM198B Gene
chr12:55,829,608-55,836,246
(GRCh38/hg38)
Size:
6,639 bases
Orientation:
Plus strand
chr12:56,223,392-56,230,030
(GRCh37/hg19)
Size:
6,639 bases
Orientation:
Plus strand

Genomic View for TMEM198B Gene

Genes around TMEM198B on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TMEM198B Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TMEM198B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TMEM198B Gene

Proteins for TMEM198B Gene

Post-translational modifications for TMEM198B Gene

No Post-translational modifications

No data available for DME Specific Peptides for TMEM198B Gene

Domains & Families for TMEM198B Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for TMEM198B Gene

Function for TMEM198B Gene

Phenotypes From GWAS Catalog for TMEM198B Gene

Phenotypes for TMEM198B Gene

genes like me logo Genes that share phenotypes with TMEM198B: view

Animal Model Products

  • Taconic Biosciences Mouse Models for TMEM198B

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TMEM198B Gene

Localization for TMEM198B Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TMEM198B Gene

Pathways & Interactions for TMEM198B Gene

PathCards logo

SuperPathways for TMEM198B Gene

No Data Available

Gene Ontology (GO) - Biological Process for TMEM198B Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for TMEM198B Gene

Drugs & Compounds for TMEM198B Gene

No Compound Related Data Available

Transcripts for TMEM198B Gene

mRNA/cDNA for TMEM198B Gene

1 REFSEQ mRNAs :
8 NCBI additional mRNA sequence :
15 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TMEM198B Gene

No ASD Table

Relevant External Links for TMEM198B Gene

GeneLoc Exon Structure for
TMEM198B

Expression for TMEM198B Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for TMEM198B Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for TMEM198B

SOURCE GeneReport for Unigene cluster for TMEM198B Gene:

Hs.731828
genes like me logo Genes that share expression patterns with TMEM198B: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TMEM198B Gene

Orthologs for TMEM198B Gene

Evolution for TMEM198B Gene

ENSEMBL:
Gene Tree for TMEM198B (if available)
TreeFam:
Gene Tree for TMEM198B (if available)

No data available for Orthologs for TMEM198B Gene

Paralogs for TMEM198B Gene

No data available for Paralogs for TMEM198B Gene

Variants for TMEM198B Gene

Structural Variations from Database of Genomic Variants (DGV) for TMEM198B Gene

Variant ID Type Subtype PubMed ID
nsv1138137 CNV deletion 24896259
nsv832423 CNV gain 17160897

Additional Variant Information for TMEM198B Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TMEM198B

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) and Variation tolerance for TMEM198B Gene

Disorders for TMEM198B Gene

Additional Disease Information for TMEM198B

No disorders were found for TMEM198B Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TMEM198B Gene

Publications for TMEM198B Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3
  2. The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment. (PMID: 12975309) Clark HF … Gray A (Genome research 2003) 3
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3

Products for TMEM198B Gene

Sources for TMEM198B Gene