Aliases for TMEM167B-DT Gene

Data sources for TMEM167B-DT Gene:

Subcategory (RNA class) for TMEM167B-DT Gene

lncRNA

Aliases for TMEM167B-DT Gene

External Ids for TMEM167B-DT Gene

Summaries for TMEM167B-DT Gene

GeneCards Summary for TMEM167B-DT Gene

TMEM167B-DT (TMEM167B Divergent Transcript) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for TMEM167B-DT Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for TMEM167B-DT Gene

Genomics for TMEM167B-DT Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for TMEM167B-DT Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around TMEM167B-DT on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for TMEM167B-DT Gene

Latest Assembly
chr1:109,078,320-109,090,891
(GRCh38/hg38)
Size:
12,572 bases
Orientation:
Minus strand

Previous Assembly
chr1:109,630,593-109,633,480
(GRCh37/hg19 by Ensembl)
Size:
2,888 bases
Orientation:
Minus strand

Genomic View for TMEM167B-DT Gene

Genes around TMEM167B-DT on UCSC Golden Path with GeneCards custom track
TMEM167B-DT in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
TMEM167B-DT Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TMEM167B-DT Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TMEM167B-DT Gene

Proteins for TMEM167B-DT Gene

Post-translational modifications for TMEM167B-DT Gene

No Post-translational modifications

No data available for DME Specific Peptides for TMEM167B-DT Gene

Domains & Families for TMEM167B-DT Gene

Gene Families for TMEM167B-DT Gene

genes like me logo Genes that share domains with TMEM167B-DT: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for TMEM167B-DT Gene

Function for TMEM167B-DT Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TMEM167B-DT Gene

Localization for TMEM167B-DT Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TMEM167B-DT Gene

Pathways & Interactions for TMEM167B-DT Gene

PathCards logo

SuperPathways for TMEM167B-DT Gene

No Data Available

Gene Ontology (GO) - Biological Process for TMEM167B-DT Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for TMEM167B-DT Gene

Drugs & Compounds for TMEM167B-DT Gene

No Compound Related Data Available

Transcripts for TMEM167B-DT Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for TMEM167B-DT Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000021F608_9606 lncRNA 2889 2

Ensembl: ENST00000608574 (view in UCSC) ,

LNCipedia: lnc-TAF13-2:1,

URS0000D58ADD_9606 lncRNA 3529 1

LNCipedia: lnc-TAF13-2:4,

URS0001BD290C_9606 lncRNA 3528 1

LncBook: HSALNT0012175,

URS0000D5A7AA_9606 lncRNA 2922 1

LNCipedia: lnc-TAF13-2:2,

URS0000D5AEEC_9606 lncRNA 899 1

LNCipedia: lnc-TAF13-2:3,

TMEM167B-DT in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for TMEM167B-DT Gene

No ASD Table

Relevant External Links for TMEM167B-DT Gene

GeneLoc Exon Structure for
TMEM167B-DT

No data available for mRNA/cDNA for TMEM167B-DT Gene

Expression for TMEM167B-DT Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TMEM167B-DT Gene

Orthologs for TMEM167B-DT Gene

Evolution for TMEM167B-DT Gene

ENSEMBL:
Gene Tree for TMEM167B-DT (if available)
TreeFam:
Gene Tree for TMEM167B-DT (if available)

No data available for Orthologs for TMEM167B-DT Gene

Paralogs for TMEM167B-DT Gene

No data available for Paralogs for TMEM167B-DT Gene

Variants for TMEM167B-DT Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for TMEM167B-DT Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Additional Variant Information for TMEM167B-DT Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TMEM167B-DT

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TMEM167B-DT Gene

Disorders for TMEM167B-DT Gene

Additional Disease Information for TMEM167B-DT

Open Targets Platform
Open Targets Platform

No disorders were found for TMEM167B-DT Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TMEM167B-DT Gene

Publications for TMEM167B-DT Gene

No publications were found for TMEM167B-DT Gene.

No data available for Mastermind for TMEM167B-DT Gene

Products for TMEM167B-DT Gene

Sources for TMEM167B-DT Gene