TMEM167B-DT Gene (RNA Gene)

TMEM167B Divergent Transcript

GC01M109080
GIFtS:
6
See more...

Aliases for TMEM167B-DT Gene

Data sources for TMEM167B-DT Gene:

Subcategory (RNA class) for TMEM167B-DT Gene

lncRNA

Aliases for TMEM167B-DT Gene

External Ids for TMEM167B-DT Gene

Summaries for TMEM167B-DT Gene

GeneCards Summary for TMEM167B-DT Gene

TMEM167B-DT (TMEM167B Divergent Transcript) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for TMEM167B-DT Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for TMEM167B-DT Gene

Genomics for TMEM167B-DT Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for TMEM167B-DT Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around TMEM167B-DT on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for TMEM167B-DT Gene

Latest Assembly
chr1:109,078,320-109,090,891
(GRCh38/hg38)
Size:
12,572 bases
Orientation:
Minus strand

Previous Assembly
chr1:109,630,593-109,633,480
(GRCh37/hg19 by Ensembl)
Size:
2,888 bases
Orientation:
Minus strand

Genomic View for TMEM167B-DT Gene

Genes around TMEM167B-DT on UCSC Golden Path with GeneCards custom track
TMEM167B-DT in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
TMEM167B-DT Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TMEM167B-DT Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for TMEM167B-DT Gene

Proteins for TMEM167B-DT Gene

Products:

  1. Antibodies for research
  2. Protein products for research
  3. Assay products for research

Post-translational modifications for TMEM167B-DT Gene

No Post-translational modifications

No data available for DME Specific Peptides for TMEM167B-DT Gene

Domains & Families for TMEM167B-DT Gene

Gene Families for TMEM167B-DT Gene

HGNC:
genes like me logo Genes that share domains with TMEM167B-DT: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for TMEM167B-DT Gene

Function for TMEM167B-DT Gene

Products:

  1. Animal Models for research
  2. CRISPR products for research
  3. miRNA products for research
  4. Inhibitory RNAs for research
  5. Clone products for research
  6. Cell Lines for research

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TMEM167B-DT Gene

Localization for TMEM167B-DT Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TMEM167B-DT Gene

Pathways & Interactions for TMEM167B-DT Gene

PathCards logo

SuperPathways for TMEM167B-DT Gene

No Data Available

Gene Ontology (GO) - Biological Process for TMEM167B-DT Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for TMEM167B-DT Gene

Drugs & Compounds for TMEM167B-DT Gene

Products:

  1. Drug products for research
No Compound Related Data Available

Transcripts for TMEM167B-DT Gene

Products:

  1. CRISPR products for research
  2. miRNA products for research
  3. Inhibitory RNAs for research
  4. Clone products for research

Non-coding RNA (ncRNA) Transcripts from RNAcentral for TMEM167B-DT Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000021F608_9606 lncRNA 2889 2

Ensembl: ENST00000608574 (view in UCSC) ,

LNCipedia: lnc-TAF13-2:1,

URS0000D58ADD_9606 lncRNA 3529 1

LNCipedia: lnc-TAF13-2:4,

URS0001BD290C_9606 lncRNA 3528 1

LncBook: HSALNT0012175,

URS0000D5A7AA_9606 lncRNA 2922 1

LNCipedia: lnc-TAF13-2:2,

URS0000D5AEEC_9606 lncRNA 899 1

LNCipedia: lnc-TAF13-2:3,

TMEM167B-DT in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for TMEM167B-DT Gene

No ASD Table

Relevant External Links for TMEM167B-DT Gene

GeneLoc Exon Structure for
TMEM167B-DT

No data available for mRNA/cDNA for TMEM167B-DT Gene

Expression for TMEM167B-DT Gene

Products:

  1. Primer products for research
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TMEM167B-DT Gene

Orthologs for TMEM167B-DT Gene

Evolution for TMEM167B-DT Gene

ENSEMBL:
Gene Tree for TMEM167B-DT (if available)
TreeFam:
Gene Tree for TMEM167B-DT (if available)

No data available for Orthologs for TMEM167B-DT Gene

Paralogs for TMEM167B-DT Gene

No data available for Paralogs for TMEM167B-DT Gene

Variants for TMEM167B-DT Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for TMEM167B-DT Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Additional Variant Information for TMEM167B-DT Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TMEM167B-DT

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TMEM167B-DT Gene

Disorders for TMEM167B-DT Gene

Additional Disease Information for TMEM167B-DT

Open Targets Platform
Open Targets Platform

No disorders were found for TMEM167B-DT Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TMEM167B-DT Gene

Publications for TMEM167B-DT Gene

No publications were found for TMEM167B-DT Gene.

No data available for Mastermind for TMEM167B-DT Gene

Products for TMEM167B-DT Gene

Sources for TMEM167B-DT Gene