Aliases for TMEM147-AS1 Gene

Subcategory (RNA class) for TMEM147-AS1 Gene

lncRNA

Quality Score for this RNA gene is

15

Aliases for TMEM147-AS1 Gene

  • TMEM147 Antisense RNA 1 2 3 5
  • TMEM147-AS1 2 170
  • HSALNG0125628 169
  • NONHSAG025583 94

External Ids for TMEM147-AS1 Gene

Previous GeneCards Identifiers for TMEM147-AS1 Gene

  • GC19M035767
  • GC19M035925
  • GC19M040543
  • GC19M040965
  • GC19M035950
  • GC19M036820
  • GC19M037439
  • GC19M037778
  • GC19M038078
  • GC19M038365
  • GC19M038659
  • GC19M040151

Summaries for TMEM147-AS1 Gene

GeneCards Summary for TMEM147-AS1 Gene

TMEM147-AS1 (TMEM147 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for TMEM147-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for TMEM147-AS1 Gene

Genomics for TMEM147-AS1 Gene

GeneHancer (GH) Regulatory Elements for TMEM147-AS1 Gene

Promoters and enhancers for TMEM147-AS1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around TMEM147-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TMEM147-AS1 Gene

Genomic Locations for TMEM147-AS1 Gene
chr19:35,540,512-35,546,029
(GRCh38/hg38)
Size:
5,518 bases
Orientation:
Minus strand

Genomic View for TMEM147-AS1 Gene

Genes around TMEM147-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TMEM147-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TMEM147-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TMEM147-AS1 Gene

Proteins for TMEM147-AS1 Gene

Post-translational modifications for TMEM147-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TMEM147-AS1 Gene

Domains & Families for TMEM147-AS1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for TMEM147-AS1 Gene

Function for TMEM147-AS1 Gene

Phenotypes From GWAS Catalog for TMEM147-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TMEM147-AS1 Gene

Localization for TMEM147-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TMEM147-AS1 Gene

Pathways & Interactions for TMEM147-AS1 Gene

PathCards logo

SuperPathways for TMEM147-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for TMEM147-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TMEM147-AS1 Gene

Drugs & Compounds for TMEM147-AS1 Gene

No Compound Related Data Available

Transcripts for TMEM147-AS1 Gene

mRNA/cDNA for TMEM147-AS1 Gene

(1) REFSEQ mRNAs :
(3) Additional mRNA sequences :
(10) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(9) NONCODE transcripts :
(17) RNACentral transcripts :
(6) LncBook transcripts :
(14) LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for TMEM147-AS1 Gene

No ASD Table

Relevant External Links for TMEM147-AS1 Gene

GeneLoc Exon Structure for
TMEM147-AS1
ECgene alternative splicing isoforms for
TMEM147-AS1

Expression for TMEM147-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TMEM147-AS1 Gene

genes like me logo Genes that share expression patterns with TMEM147-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TMEM147-AS1 Gene

Orthologs for TMEM147-AS1 Gene

Evolution for TMEM147-AS1 Gene

ENSEMBL:
Gene Tree for TMEM147-AS1 (if available)
TreeFam:
Gene Tree for TMEM147-AS1 (if available)

No data available for Orthologs for TMEM147-AS1 Gene

Paralogs for TMEM147-AS1 Gene

No data available for Paralogs for TMEM147-AS1 Gene

Variants for TMEM147-AS1 Gene

Sequence variations from dbSNP and Humsavar for TMEM147-AS1 Gene

SNP ID Clin Chr 19 pos Variation AA Info Type
rs193920833 uncertain-significance, Malignant tumor of prostate 35,544,981(-) G/A intron_variant
rs1000513581 -- 35,546,017(-) G/A non_coding_transcript_variant
rs1001088815 -- 35,544,644(-) C/T intron_variant
rs1001192119 -- 35,541,806(-) A/G non_coding_transcript_variant
rs1001207725 -- 35,547,327(-) C/T upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for TMEM147-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv953285 CNV deletion 24416366

Additional Variant Information for TMEM147-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TMEM147-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for TMEM147-AS1 Gene

Disorders for TMEM147-AS1 Gene

Additional Disease Information for TMEM147-AS1

No disorders were found for TMEM147-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TMEM147-AS1 Gene

Publications for TMEM147-AS1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 56

Products for TMEM147-AS1 Gene

Sources for TMEM147-AS1 Gene