Aliases for TMEM132D-AS1 Gene

Subcategory (RNA class) for TMEM132D-AS1 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for TMEM132D-AS1 Gene

  • TMEM132D Antisense RNA 1 2 3 5
  • TMEM132D-AS1 2 168
  • NONHSAG012732 92
  • HSALNG0095075 167
  • RP11-669N7.2 3

External Ids for TMEM132D-AS1 Gene

Summaries for TMEM132D-AS1 Gene

GeneCards Summary for TMEM132D-AS1 Gene

TMEM132D-AS1 (TMEM132D Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for TMEM132D-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for TMEM132D-AS1 Gene

Genomics for TMEM132D-AS1 Gene

GeneHancer (GH) Regulatory Elements for TMEM132D-AS1 Gene

Promoters and enhancers for TMEM132D-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J129075 Enhancer 0.4 ENCODE 0.3 -33.0 -33035 1.8 FOXA1 RFX5 GATA3 ENSG00000257025 NONHSAG012731.2 TMEM132D-AS1 TMEM132D
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around TMEM132D-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TMEM132D-AS1 Gene

Genomic Locations for TMEM132D-AS1 Gene
chr12:129,109,463-129,113,303
(GRCh38/hg38)
Size:
3,841 bases
Orientation:
Plus strand
chr12:129,594,174-129,597,839
(GRCh37/hg19)
Size:
3,666 bases
Orientation:
Plus strand

Genomic View for TMEM132D-AS1 Gene

Genes around TMEM132D-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TMEM132D-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TMEM132D-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TMEM132D-AS1 Gene

Proteins for TMEM132D-AS1 Gene

Post-translational modifications for TMEM132D-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TMEM132D-AS1 Gene

Domains & Families for TMEM132D-AS1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for TMEM132D-AS1 Gene

Function for TMEM132D-AS1 Gene

Phenotypes From GWAS Catalog for TMEM132D-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TMEM132D-AS1 Gene

Localization for TMEM132D-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TMEM132D-AS1 Gene

Pathways & Interactions for TMEM132D-AS1 Gene

PathCards logo

SuperPathways for TMEM132D-AS1 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for TMEM132D-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for TMEM132D-AS1 Gene

Drugs & Compounds for TMEM132D-AS1 Gene

No Compound Related Data Available

Transcripts for TMEM132D-AS1 Gene

mRNA/cDNA for TMEM132D-AS1 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for TMEM132D-AS1 Gene

No ASD Table

Relevant External Links for TMEM132D-AS1 Gene

GeneLoc Exon Structure for
TMEM132D-AS1

Expression for TMEM132D-AS1 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for TMEM132D-AS1

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TMEM132D-AS1 Gene

Orthologs for TMEM132D-AS1 Gene

Evolution for TMEM132D-AS1 Gene

ENSEMBL:
Gene Tree for TMEM132D-AS1 (if available)
TreeFam:
Gene Tree for TMEM132D-AS1 (if available)

No data available for Orthologs for TMEM132D-AS1 Gene

Paralogs for TMEM132D-AS1 Gene

No data available for Paralogs for TMEM132D-AS1 Gene

Variants for TMEM132D-AS1 Gene

Additional dbSNP identifiers (rs#s) for TMEM132D-AS1 Gene

Structural Variations from Database of Genomic Variants (DGV) for TMEM132D-AS1 Gene

Variant ID Type Subtype PubMed ID
esv3631156 CNV gain 21293372
nsv1040831 CNV gain 25217958
nsv517810 CNV loss 19592680
nsv832550 CNV loss 17160897

Additional Variant Information for TMEM132D-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TMEM132D-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for TMEM132D-AS1 Gene

Disorders for TMEM132D-AS1 Gene

Additional Disease Information for TMEM132D-AS1

No disorders were found for TMEM132D-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TMEM132D-AS1 Gene

Publications for TMEM132D-AS1 Gene

  1. Identification of long noncoding RNA RP11-169F17.1 and RP11-669N7.2 as novel prognostic biomarkers of stomach adenocarcinoma based on integrated bioinformatics analysis. (PMID: 31368349) Yang J … Song H (Epigenomics 2019) 2 3 54
  2. The Effect of Botulinum Toxin Type A on Expression Profiling of Long Noncoding RNAs in Human Dermal Fibroblasts. (PMID: 28265570) Miao YY … Zhou BR (BioMed research international 2017) 2 3 54
  3. Transcriptome analysis of human gastric cancer. (PMID: 16341674) Oh JH … Kim NS (Mammalian genome : official journal of the International Mammalian Genome Society 2005) 3 54
  4. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 54
  5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 54

Products for TMEM132D-AS1 Gene

Sources for TMEM132D-AS1 Gene