Aliases for TMEM109-DT Gene

Data sources for TMEM109-DT Gene:

RNA type for TMEM109-DT Gene

lncRNA

Aliases for TMEM109-DT Gene

External Ids for TMEM109-DT Gene

Summaries for TMEM109-DT Gene

GeneCards Summary for TMEM109-DT Gene

TMEM109-DT (TMEM109 Divergent Transcript) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for TMEM109-DT Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for TMEM109-DT Gene

Genomics for TMEM109-DT Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for TMEM109-DT Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J060909 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 250.7 +0.2 235 8.8 BCLAF1 SP1 ZNF207 ZNF600 MYC IKZF1 SIX5 ZNF592 POLR2A ZIC2 TMEM109 ENSG00000256944 TMEM109-DT CD6 CD5 PRPF19 PTGDR2 SLC15A3 CYB561A3 VPS37C
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around TMEM109-DT on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for TMEM109-DT Gene

Latest Assembly
chr11:60,913,166-60,913,975
(GRCh38/hg38)
Size:
810 bases
Orientation:
Minus strand

Genomic View for TMEM109-DT Gene

Genes around TMEM109-DT on UCSC Golden Path with GeneCards custom track
TMEM109-DT in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
TMEM109-DT Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TMEM109-DT Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TMEM109-DT Gene

Proteins for TMEM109-DT Gene

Post-translational modifications for TMEM109-DT Gene

No Post-translational modifications

No data available for DME Specific Peptides for TMEM109-DT Gene

Domains & Families for TMEM109-DT Gene

Gene Families for TMEM109-DT Gene

genes like me logo Genes that share domains with TMEM109-DT: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for TMEM109-DT Gene

Function for TMEM109-DT Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TMEM109-DT Gene

Localization for TMEM109-DT Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TMEM109-DT Gene

Pathways & Interactions for TMEM109-DT Gene

PathCards logo

SuperPathways for TMEM109-DT Gene

No Data Available

Gene Ontology (GO) - Biological Process for TMEM109-DT Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for TMEM109-DT Gene

Drugs & Compounds for TMEM109-DT Gene

No Compound Related Data Available

Transcripts for TMEM109-DT Gene

TMEM109-DT in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for TMEM109-DT Gene

No ASD Table

Relevant External Links for TMEM109-DT Gene

GeneLoc Exon Structure for
TMEM109-DT

No data available for mRNA/cDNA for TMEM109-DT Gene

Expression for TMEM109-DT Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TMEM109-DT Gene

Orthologs for TMEM109-DT Gene

No data available for Orthologs and Evolution for TMEM109-DT Gene

Paralogs for TMEM109-DT Gene

No data available for Paralogs for TMEM109-DT Gene

Variants for TMEM109-DT Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for TMEM109-DT Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Additional Variant Information for TMEM109-DT Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TMEM109-DT
Leiden Open Variation Database (LOVD)
TMEM109-DT

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TMEM109-DT Gene

Disorders for TMEM109-DT Gene

No disorders were found for TMEM109-DT Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TMEM109-DT Gene

Publications for TMEM109-DT Gene

No publications were found for TMEM109-DT Gene.

No data available for Mastermind for TMEM109-DT Gene

Products for TMEM109-DT Gene

Sources for TMEM109-DT Gene