Aliases for TMED10P2 Gene

Aliases for TMED10P2 Gene

  • Transmembrane P24 Trafficking Protein 10 Pseudogene 2 2 3 5
  • Transmembrane Emp24-Like Trafficking Protein 10 (Yeast) Pseudogene 2 2
  • Transmembrane Emp24-Like Trafficking Protein 10 Pseudogene 2 3
  • TMED10P2 5

External Ids for TMED10P2 Gene

Previous GeneCards Identifiers for TMED10P2 Gene

  • GC03P128257
  • GC03P125641

Summaries for TMED10P2 Gene

GeneCards Summary for TMED10P2 Gene

TMED10P2 (Transmembrane P24 Trafficking Protein 10 Pseudogene 2) is a Pseudogene.

Additional gene information for TMED10P2 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for TMED10P2 Gene

Genomics for TMED10P2 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for TMED10P2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03J128537 Enhancer 0.3 ENCODE 600.7 -0.7 -726 0.2 NR2F1 CEBPB TMED10P2 LINC01565 DNAJB8 LOC90246 GATA2 RPN1
GH03J128481 Promoter/Enhancer 2 EPDnew Ensembl ENCODE dbSUPER 6.3 -50.5 -50494 12.2 HNRNPL ATF7 PRDM10 ZNF629 LEF1 IKZF1 KDM1A ZNF692 JUND PHF21A GATA2-AS1 GATA2 DNAJB8 DNAJB8-AS1 TMED10P2 RPN1 POU5F1P6
GH03J128503 Enhancer 1.2 Ensembl ENCODE dbSUPER 5.6 -32.3 -32281 3.7 CREB1 TEAD4 TARDBP ZHX2 JUND DPF2 ATF7 MGA CBX3 USF2 LINC01565 DNAJB8 DNAJB8-AS1 ACAD9 GATA2-AS1 TMED10P2 LOC90246 5EW4_A-036 GATA2 RPN1
GH03J128547 Enhancer 1.1 Ensembl ENCODE 0.4 +10.8 10849 4.7 HNRNPL CREB1 ATF7 PRDM10 ZNF629 LEF1 IKZF1 JUND DDX20 MTA2 HSALNG0028804 LINC01565 DNAJB8 DNAJB8-AS1 RPN1 TMED10P2 GATA2
GH03J128531 Enhancer 0.8 Ensembl 0.4 -5.4 -5361 1.7 LEF1 MTA2 PHF21A PKNOX1 MTA1 ZNF24 DPF2 HDAC1 ETV6 SOX6 LINC01565 DNAJB8 TMED10P2 LOC90246 GATA2 RPN1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around TMED10P2 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for TMED10P2 Gene

Genomic Locations for TMED10P2 Gene
chr3:128,538,019-128,538,831
(GRCh38/hg38)
Size:
813 bases
Orientation:
Plus strand
chr3:128,256,860-128,257,474
(GRCh37/hg19)
Size:
615 bases
Orientation:
Plus strand

Genomic View for TMED10P2 Gene

Genes around TMED10P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TMED10P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TMED10P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TMED10P2 Gene

Proteins for TMED10P2 Gene

Post-translational modifications for TMED10P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TMED10P2 Gene

Domains & Families for TMED10P2 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for TMED10P2 Gene

Function for TMED10P2 Gene

Phenotypes From GWAS Catalog for TMED10P2 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TMED10P2 Gene

Localization for TMED10P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TMED10P2 Gene

Pathways & Interactions for TMED10P2 Gene

PathCards logo

SuperPathways for TMED10P2 Gene

No Data Available

Gene Ontology (GO) - Biological Process for TMED10P2 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for TMED10P2 Gene

Drugs & Compounds for TMED10P2 Gene

No Compound Related Data Available

Transcripts for TMED10P2 Gene

mRNA/cDNA for TMED10P2 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for TMED10P2 Gene

No ASD Table

Relevant External Links for TMED10P2 Gene

GeneLoc Exon Structure for
TMED10P2

Expression for TMED10P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for TMED10P2 Gene

mRNA differential expression in normal tissues according to GTEx for TMED10P2 Gene

This gene is overexpressed in Pancreas (x5.2), Uterus (x5.1), Fallopian Tube (x4.6), Cervix - Ectocervix (x4.1), and Cervix - Endocervix (x4.1).
genes like me logo Genes that share expression patterns with TMED10P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TMED10P2 Gene

Orthologs for TMED10P2 Gene

Evolution for TMED10P2 Gene

ENSEMBL:
Gene Tree for TMED10P2 (if available)
TreeFam:
Gene Tree for TMED10P2 (if available)

No data available for Orthologs for TMED10P2 Gene

Paralogs for TMED10P2 Gene

No data available for Paralogs for TMED10P2 Gene

Variants for TMED10P2 Gene

Additional Variant Information for TMED10P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TMED10P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TMED10P2 Gene

Disorders for TMED10P2 Gene

Additional Disease Information for TMED10P2

Genetic Association Database
(GAD)

No disorders were found for TMED10P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TMED10P2 Gene

Publications for TMED10P2 Gene

  1. Sequence variants affecting eosinophil numbers associate with asthma and myocardial infarction. (PMID: 19198610) Gudbjartsson DF … Stefansson K (Nature genetics 2009) 41

Products for TMED10P2 Gene

Sources for TMED10P2 Gene