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Aliases for TMED10P1 Gene

Aliases for TMED10P1 Gene

  • Transmembrane P24 Trafficking Protein 10 Pseudogene 1 2 3 5
  • Transmembrane Emp24-Like Trafficking Protein 10 (Yeast) Pseudogene 1 2
  • Transmembrane Emp24-Like Trafficking Protein 10 (Yeast) Pseudogene 2
  • Transmembrane Emp24-Like Trafficking Protein 10 Pseudogene 1 3
  • Transmembrane Emp24-Like Trafficking Protein 10 Pseudogene 3
  • Tmp21-II , Transcribed Pseudogene 3
  • Tmp21-II 3
  • TMED10P 3

External Ids for TMED10P1 Gene

Previous HGNC Symbols for TMED10P1 Gene

  • TMED10P

Previous GeneCards Identifiers for TMED10P1 Gene

  • GC08P146220

Summaries for TMED10P1 Gene

GeneCards Summary for TMED10P1 Gene

TMED10P1 (Transmembrane P24 Trafficking Protein 10 Pseudogene 1) is a Pseudogene.

Additional gene information for TMED10P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TMED10P1 Gene

Genomics for TMED10P1 Gene

GeneHancer (GH) Regulatory Elements for TMED10P1 Gene

Promoters and enhancers for TMED10P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08I144455 Enhancer 1.3 Ensembl ENCODE 57.6 -538.4 -538419 1.6 HDGF HNRNPUL1 PKNOX1 FOXA2 ARNT ZFP64 SIN3A ZNF2 POLR2B ZNF766 ZNF251 ZNF623 ZNF7 LRRC14 ZNF250 ZNF16 CPSF1 VPS28 ZNF517 ZNF34
GH08I144077 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 13 -916.1 -916097 3.4 HDGF PKNOX1 FOXA2 SMAD1 ARNT ARID4B SIN3A DMAP1 ZBTB7B YY1 ENSG00000255224 MIR6847 EXOSC4 WDR97 ZNF623 ZNF7 ZNF16 EEF1D MAF1 CPSF1
GH08I144407 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 12.5 -584.7 -584696 4.8 HDGF CLOCK SMAD1 FOXA2 ARNT ZFP64 ARID4B SIN3A DMAP1 ZNF2 CPSF1 ENSG00000272115 ZNF251 ZNF517 ZNF250 LOC105375803 LRRC14 TMED10P1 ENSG00000255164 ZNF34
GH08I144506 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 12.5 -485.9 -485896 4 HDGF PKNOX1 CLOCK ARNT ARID4B SIN3A DMAP1 ZNF2 ZBTB7B IRF4 MFSD3 ZNF7 CPSF1 VPS28 ZNF250 ZNF623 ZNF251 ENSG00000254533 LRRC14 ZNF707
GH08I144899 Promoter/Enhancer 2.4 EPDnew FANTOM5 Ensembl ENCODE 11.2 -93.3 -93274 3.6 HDGF PKNOX1 FOXA2 MLX ARID4B SIN3A DMAP1 ZNF2 ZBTB7B IRF4 ZNF250 ZNF7 CPSF1 VPS28 RPL8 ZNF16 ZNF251 SHARPIN GPAA1 PARP10
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around TMED10P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TMED10P1 Gene

Genomic Locations for TMED10P1 Gene
chr8:144,994,865-144,998,897
(GRCh38/hg38)
Size:
4,033 bases
Orientation:
Plus strand
chr8:146,220,251-146,224,283
(GRCh37/hg19)

Genomic View for TMED10P1 Gene

Genes around TMED10P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TMED10P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TMED10P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TMED10P1 Gene

Proteins for TMED10P1 Gene

Post-translational modifications for TMED10P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TMED10P1 Gene

Domains & Families for TMED10P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TMED10P1 Gene

Function for TMED10P1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TMED10P1 Gene

Localization for TMED10P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TMED10P1 Gene

Pathways & Interactions for TMED10P1 Gene

SuperPathways for TMED10P1 Gene

No Data Available

Interacting Proteins for TMED10P1 Gene

Gene Ontology (GO) - Biological Process for TMED10P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TMED10P1 Gene

Drugs & Compounds for TMED10P1 Gene

No Compound Related Data Available

Transcripts for TMED10P1 Gene

mRNA/cDNA for TMED10P1 Gene

(3) Additional mRNA sequences :
(100) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for TMED10P1 Gene

Transmembrane emp24-like trafficking protein 10 (yeast) pseudogene 1:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TMED10P1 Gene

No ASD Table

Relevant External Links for TMED10P1 Gene

GeneLoc Exon Structure for
TMED10P1
ECgene alternative splicing isoforms for
TMED10P1

Expression for TMED10P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TMED10P1 Gene

mRNA expression in normal human tissues for TMED10P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of TMED10P1 Gene:

TMED10P1

SOURCE GeneReport for Unigene cluster for TMED10P1 Gene:

Hs.744580
genes like me logo Genes that share expression patterns with TMED10P1: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TMED10P1 Gene

Orthologs for TMED10P1 Gene

Evolution for TMED10P1 Gene

ENSEMBL:
Gene Tree for TMED10P1 (if available)
TreeFam:
Gene Tree for TMED10P1 (if available)

No data available for Orthologs for TMED10P1 Gene

Paralogs for TMED10P1 Gene

No data available for Paralogs for TMED10P1 Gene

Variants for TMED10P1 Gene

Structural Variations from Database of Genomic Variants (DGV) for TMED10P1 Gene

Variant ID Type Subtype PubMed ID
nsv818665 CNV loss 17921354
nsv612974 CNV gain 21841781
nsv612971 CNV loss 21841781
nsv612970 CNV gain 21841781
nsv515504 CNV gain+loss 19592680
nsv508533 CNV deletion 20534489
nsv469809 CNV loss 16826518
nsv466024 CNV gain 19166990
nsv1033208 CNV gain+loss 25217958
nsv1032588 CNV loss 25217958
nsv1022340 CNV gain 25217958
nsv1016357 CNV gain 25217958
esv3891498 CNV gain 25118596
esv3619151 CNV gain 21293372
esv3619148 CNV gain 21293372
esv2764084 CNV loss 21179565
esv2761199 CNV gain+loss 21179565
esv2759653 CNV loss 17122850
esv2672137 CNV deletion 23128226
dgv7340n100 CNV loss 25217958
dgv7339n100 CNV gain 25217958
dgv7338n100 CNV gain 25217958
dgv2119e212 CNV loss 25503493
dgv1429e214 CNV loss 21293372
dgv1428e214 CNV loss 21293372
dgv12445n54 CNV loss 21841781

Additional Variant Information for TMED10P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TMED10P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Variation tolerance for TMED10P1 Gene

Disorders for TMED10P1 Gene

Additional Disease Information for TMED10P1

No disorders were found for TMED10P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TMED10P1 Gene

Publications for TMED10P1 Gene

  1. A comparative study of rat and human Tmp21 (p23) reveals the pseudogene-like features of human Tmp21-II. (PMID: 10376215) Hörer J … Schulz I (DNA sequence : the journal of DNA sequencing and mapping 1999) 2 3 58
  2. Insights into RNA biology from an atlas of mammalian mRNA-binding proteins. (PMID: 22658674) Castello A … Hentze MW (Cell 2012) 3 58
  3. Tmp21 and p24A, two type I proteins enriched in pancreatic microsomal membranes, are members of a protein family involved in vesicular trafficking. (PMID: 8663407) Blum R … Schulz I (The Journal of biological chemistry 1996) 3 58

Products for TMED10P1 Gene

Sources for TMED10P1 Gene

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