Free for academic non-profit institutions. Other users need a Commercial license
TMCC2 (Transmembrane And Coiled-Coil Domain Family 2) is a Protein Coding gene. An important paralog of this gene is TMCC1.
GO ID | Qualified GO term | Evidence | PubMed IDs |
---|---|---|---|
GO:0005515 | protein binding | IPI | 21593558 |
GO ID | Qualified GO term | Evidence | PubMed IDs |
---|---|---|---|
GO:0005783 | endoplasmic reticulum | IBA,IDA | 21593558 |
GO:0005789 | endoplasmic reticulum membrane | IEA | -- |
GO:0016020 | membrane | IEA | -- |
GO:0016021 | integral component of membrane | IEA | -- |
GO ID | Qualified GO term | Evidence | PubMed IDs |
---|---|---|---|
GO:0042982 | amyloid precursor protein metabolic process | IDA,IBA | 21593558 |
ExUns: | 1 | ^ | 2 | ^ | 3a | · | 3b | ^ | 4a | · | 4b | ^ | 5a | · | 5b | ^ | 6 | ^ | 7a | · | 7b | · | 7c | ^ | 8 | ^ | 9a | · | 9b |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SP1: | - | - | - | - | - | - | - | ||||||||||||||||||||||
SP2: | - | - | - | - | |||||||||||||||||||||||||
SP3: | - | - | |||||||||||||||||||||||||||
SP4: | - | ||||||||||||||||||||||||||||
SP5: | - | - | - | ||||||||||||||||||||||||||
SP6: | |||||||||||||||||||||||||||||
SP7: |
This gene was present in the common ancestor of animals.
Organism | Taxonomy | Gene | Similarity | Type | Details |
---|---|---|---|---|---|
chimpanzee (Pan troglodytes) |
Mammalia | TMCC2 33 32 |
|
OneToOne | |
dog (Canis familiaris) |
Mammalia | TMCC2 33 32 |
|
OneToOne | |
oppossum (Monodelphis domestica) |
Mammalia | TMCC2 33 |
|
OneToOne | |
cow (Bos Taurus) |
Mammalia | TMCC2 33 32 |
|
OneToOne | |
mouse (Mus musculus) |
Mammalia | Tmcc2 17 33 32 |
|
||
rat (Rattus norvegicus) |
Mammalia | Tmcc2 32 |
|
||
platypus (Ornithorhynchus anatinus) |
Mammalia | TMCC2 33 |
|
OneToOne | |
chicken (Gallus gallus) |
Aves | TMCC2 33 32 |
|
OneToOne | |
lizard (Anolis carolinensis) |
Reptilia | TMCC2 33 |
|
OneToOne | |
tropical clawed frog (Silurana tropicalis) |
Amphibia | tmcc2 32 |
|
||
zebrafish (Danio rerio) |
Actinopterygii | tmcc2 33 32 |
|
OneToOne | |
fruit fly (Drosophila melanogaster) |
Insecta | CG1021 33 |
|
OneToMany | |
worm (Caenorhabditis elegans) |
Secernentea | C15H9.4 33 |
|
OneToMany | |
sea squirt (Ciona savignyi) |
Ascidiacea | CSA.5281 33 |
|
OneToMany | |
Cin.5750 32 |
|
||||
sea squirt (Ciona intestinalis) |
Ascidiacea | Cin.5750 32 |
|
SNP ID | Clin | Chr 01 pos | Variation | AA Info | Type |
---|---|---|---|---|---|
rs77588763 | uncertain-significance, not provided | 205,241,699(+) | C/A/T | coding_sequence_variant, genic_upstream_transcript_variant, stop_gained, synonymous_variant | |
rs1000010210 | -- | 205,273,346(+) | C/T | downstream_transcript_variant | |
rs1000093790 | -- | 205,231,540(+) | T/A | genic_upstream_transcript_variant, intron_variant | |
rs1000282860 | -- | 205,262,402(+) | G/A | intron_variant | |
rs1000358808 | -- | 205,255,270(+) | C/T | genic_upstream_transcript_variant, intron_variant, upstream_transcript_variant |
Variant ID | Type | Subtype | PubMed ID |
---|---|---|---|
nsv1126226 | CNV | deletion | 24896259 |
nsv477442 | CNV | novel sequence insertion | 20440878 |
No disorders were found for TMCC2 Gene.