Aliases for TMA16P1 Gene

Aliases for TMA16P1 Gene

  • Translation Machinery Associated 16 Homolog Pseudogene 1 2 3 5
  • FLJ11184 Pseudogene 3

External Ids for TMA16P1 Gene

Previous GeneCards Identifiers for TMA16P1 Gene

  • GC11M058563

Summaries for TMA16P1 Gene

GeneCards Summary for TMA16P1 Gene

TMA16P1 (Translation Machinery Associated 16 Homolog Pseudogene 1) is a Pseudogene.

Additional gene information for TMA16P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for TMA16P1 Gene

Genomics for TMA16P1 Gene

GeneHancer (GH) Regulatory Elements for TMA16P1 Gene

Promoters and enhancers for TMA16P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J058796 Enhancer 0.6 Ensembl 750.6 +0.4 355 0.4 FOXA1 HLF CEBPA FOXA2 CEBPB ZBTB17 CEBPG RAD21 NFIL3 HNF4A lnc-GLYATL2-3 TMA16P1 CNTF GLYATL2 HSALNG0084366
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around TMA16P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TMA16P1 Gene

Genomic Locations for TMA16P1 Gene
chr11:58,795,203-58,796,955
(GRCh38/hg38)
Size:
1,753 bases
Orientation:
Minus strand
chr11:58,562,676-58,564,428
(GRCh37/hg19)
Size:
1,753 bases
Orientation:
Minus strand

Genomic View for TMA16P1 Gene

Genes around TMA16P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TMA16P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TMA16P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TMA16P1 Gene

Proteins for TMA16P1 Gene

Post-translational modifications for TMA16P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TMA16P1 Gene

Domains & Families for TMA16P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for TMA16P1 Gene

Function for TMA16P1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TMA16P1 Gene

Localization for TMA16P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TMA16P1 Gene

Pathways & Interactions for TMA16P1 Gene

PathCards logo

SuperPathways for TMA16P1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for TMA16P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TMA16P1 Gene

Drugs & Compounds for TMA16P1 Gene

No Compound Related Data Available

Transcripts for TMA16P1 Gene

mRNA/cDNA for TMA16P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for TMA16P1 Gene

No ASD Table

Relevant External Links for TMA16P1 Gene

GeneLoc Exon Structure for
TMA16P1
ECgene alternative splicing isoforms for
TMA16P1

Expression for TMA16P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TMA16P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of TMA16P1 Gene:

TMA16P1
genes like me logo Genes that share expression patterns with TMA16P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TMA16P1 Gene

Orthologs for TMA16P1 Gene

Evolution for TMA16P1 Gene

ENSEMBL:
Gene Tree for TMA16P1 (if available)
TreeFam:
Gene Tree for TMA16P1 (if available)

No data available for Orthologs for TMA16P1 Gene

Paralogs for TMA16P1 Gene

No data available for Paralogs for TMA16P1 Gene

Variants for TMA16P1 Gene

Additional Variant Information for TMA16P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TMA16P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TMA16P1 Gene

Disorders for TMA16P1 Gene

No disorders were found for TMA16P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TMA16P1 Gene

Publications for TMA16P1 Gene

No publications were found for TMA16P1 Gene.

No data available for External Links for TMA16P1 Gene

Products for TMA16P1 Gene

Sources for TMA16P1 Gene