Aliases for TLK2P1 Gene

Aliases for TLK2P1 Gene

  • Tousled Like Kinase 2 Pseudogene 1 2 3 5
  • TLK2ps1 2 3
  • Tousled-Like Kinase 2 Pseudogene 1 2
  • TLK2P1 5

External Ids for TLK2P1 Gene

Previous GeneCards Identifiers for TLK2P1 Gene

  • GC17U900568
  • GC17M029390
  • GC17M032363

Summaries for TLK2P1 Gene

GeneCards Summary for TLK2P1 Gene

TLK2P1 (Tousled Like Kinase 2 Pseudogene 1) is a Pseudogene.

Additional gene information for TLK2P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for TLK2P1 Gene

Genomics for TLK2P1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for TLK2P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J034039 Promoter 0.4 Ensembl 250.7 -0.1 -51 1 EZH2 TLK2P1 lnc-CCL1-8 ASIC2 LOC107987247 ENSG00000279668 ENSG00000265356 HSALNG0115841-002
GH17J034979 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas 19.1 -940.9 -940934 3.5 SP1 ZNF207 ZNF600 NCOR1 MYC SSRP1 ZNF580 ZNF592 ATF2 KLF9 LIG3 CCT6B lnc-LIG3-2 ZNF830 TLK2P1 ASIC2 lnc-CCT6B-3
GH17J034960 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 14.8 -921.9 -921851 3 BCLAF1 SP1 ZNF207 NCOR1 MYC SSRP1 JUND ZNF592 ATF2 KLF9 ZNF830 piR-53467 CCT6B LIG3 TLK2P1 CCL13 C17orf50 lnc-CCT6B-3
GH17J034608 Enhancer 0.9 Ensembl ENCODE 9.9 -568.4 -568350 4.8 ZNF600 ATF2 ZNF10 ZIC2 ZNF341 KLF9 ZNF146 RFX1 GLIS1 ZNF398 LIG3 TLK2P1 ENSG00000278860 HSALNG0115885 HSALNG0115884 TMEM132E ZNF830
GH17J034346 Enhancer 0.7 Ensembl 10.7 -307.1 -307051 1 ATF1 IRF9 FOXK2 ATF4 HDAC1 ARID1B CEBPB ZNF507 ATF3 RNF2 LIG3 CCL11 TLK2P1 ASIC2 ZNF830 CCL13 ENSG00000265614 lnc-CCL1-4 CCL8
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around TLK2P1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for TLK2P1 Gene

Latest Assembly
chr17:34,036,681-34,040,050
(GRCh38/hg38)
Size:
3,370 bases
Orientation:
Minus strand

Previous Assembly
chr17:32,363,723-32,367,069
(GRCh37/hg19 by Entrez Gene)
Size:
3,347 bases
Orientation:
Minus strand

chr17:32,363,700-32,366,891
(GRCh37/hg19 by Ensembl)
Size:
3,192 bases
Orientation:
Minus strand

Genomic View for TLK2P1 Gene

Genes around TLK2P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TLK2P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TLK2P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TLK2P1 Gene

Proteins for TLK2P1 Gene

Post-translational modifications for TLK2P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TLK2P1 Gene

Domains & Families for TLK2P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for TLK2P1 Gene

Function for TLK2P1 Gene

Phenotypes From GWAS Catalog for TLK2P1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TLK2P1 Gene

Localization for TLK2P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TLK2P1 Gene

Pathways & Interactions for TLK2P1 Gene

PathCards logo

SuperPathways for TLK2P1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for TLK2P1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for TLK2P1 Gene

Drugs & Compounds for TLK2P1 Gene

No Compound Related Data Available

Transcripts for TLK2P1 Gene

mRNA/cDNA for TLK2P1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TLK2P1 Gene

No ASD Table

Relevant External Links for TLK2P1 Gene

GeneLoc Exon Structure for
TLK2P1

Expression for TLK2P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for TLK2P1 Gene

genes like me logo Genes that share expression patterns with TLK2P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TLK2P1 Gene

Orthologs for TLK2P1 Gene

Evolution for TLK2P1 Gene

ENSEMBL:
Gene Tree for TLK2P1 (if available)
TreeFam:
Gene Tree for TLK2P1 (if available)
Alliance of Genome Resources:
Additional Orthologs for TLK2P1

No data available for Orthologs for TLK2P1 Gene

Paralogs for TLK2P1 Gene

No data available for Paralogs for TLK2P1 Gene

Variants for TLK2P1 Gene

Additional Variant Information for TLK2P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TLK2P1
Leiden Open Variation Database (LOVD)
TLK2P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TLK2P1 Gene

Disorders for TLK2P1 Gene

No disorders were found for TLK2P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TLK2P1 Gene

Publications for TLK2P1 Gene

  1. A genome-wide association study for blood lipid phenotypes in the Framingham Heart Study. (PMID: 17903299) Kathiresan S … Cupples LA (BMC medical genetics 2007) 40

Products for TLK2P1 Gene

Sources for TLK2P1 Gene