Aliases for THUMPD3P1 Gene

Aliases for THUMPD3P1 Gene

  • THUMP Domain Containing 3 Pseudogene 1 2 3 5

External Ids for THUMPD3P1 Gene

Summaries for THUMPD3P1 Gene

GeneCards Summary for THUMPD3P1 Gene

THUMPD3P1 (THUMP Domain Containing 3 Pseudogene 1) is a Pseudogene.

Additional gene information for THUMPD3P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for THUMPD3P1 Gene

Genomics for THUMPD3P1 Gene

GeneHancer (GH) Regulatory Elements for THUMPD3P1 Gene

Promoters and enhancers for THUMPD3P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J040151 Enhancer 0.2 Ensembl 500.7 +0.1 88 0.2 lnc-CDK13-4 THUMPD3P1 piR-33142-029 NONHSAG047421.2 SUGCT RF00017-6128
GH07J040152 Enhancer 0.2 Ensembl 500.7 +0.6 588 0.4 lnc-CDK13-4 THUMPD3P1 piR-33142-029 NONHSAG047421.2 SUGCT RF00017-6128
GH07J040148 Enhancer 0.4 Ensembl 0.7 -2.7 -2712 0.6 TAL1 TEAD4 CBFA2T3 piR-43164-063 SUGCT LINC00265 lnc-CDK13-4 THUMPD3P1 NONHSAG047421.2 RF00017-6128
GH07J040156 Enhancer 0.3 ENCODE 0.4 +5.6 5648 1.7 IKZF1 SUGCT MPLKIP LINC00265 THUMPD3P1 lnc-CDK13-4 piR-33142-029 NONHSAG047421.2 RF00017-6128
GH07J040167 Enhancer 0.2 ENCODE 0.4 +16.8 16833 1.2 SUGCT piR-33142-029 RF00017-6128 lnc-CDK13-4 THUMPD3P1 NONHSAG047421.2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around THUMPD3P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for THUMPD3P1 Gene

Genomic Locations for THUMPD3P1 Gene
chr7:40,151,613-40,154,364
(GRCh38/hg38)
Size:
2,752 bases
Orientation:
Plus strand
chr7:40,191,212-40,193,750
(GRCh37/hg19)
Size:
2,539 bases
Orientation:
Plus strand

Genomic View for THUMPD3P1 Gene

Genes around THUMPD3P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
THUMPD3P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for THUMPD3P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for THUMPD3P1 Gene

Proteins for THUMPD3P1 Gene

Post-translational modifications for THUMPD3P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for THUMPD3P1 Gene

Domains & Families for THUMPD3P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for THUMPD3P1 Gene

Function for THUMPD3P1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for THUMPD3P1 Gene

Localization for THUMPD3P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for THUMPD3P1 Gene

Pathways & Interactions for THUMPD3P1 Gene

PathCards logo

SuperPathways for THUMPD3P1 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for THUMPD3P1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for THUMPD3P1 Gene

Drugs & Compounds for THUMPD3P1 Gene

No Compound Related Data Available

Transcripts for THUMPD3P1 Gene

mRNA/cDNA for THUMPD3P1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for THUMPD3P1 Gene

No ASD Table

Relevant External Links for THUMPD3P1 Gene

GeneLoc Exon Structure for
THUMPD3P1

Expression for THUMPD3P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for THUMPD3P1 Gene

genes like me logo Genes that share expression patterns with THUMPD3P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for THUMPD3P1 Gene

Orthologs for THUMPD3P1 Gene

Evolution for THUMPD3P1 Gene

ENSEMBL:
Gene Tree for THUMPD3P1 (if available)
TreeFam:
Gene Tree for THUMPD3P1 (if available)

No data available for Orthologs for THUMPD3P1 Gene

Paralogs for THUMPD3P1 Gene

No data available for Paralogs for THUMPD3P1 Gene

Variants for THUMPD3P1 Gene

Additional Variant Information for THUMPD3P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
THUMPD3P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for THUMPD3P1 Gene

Disorders for THUMPD3P1 Gene

No disorders were found for THUMPD3P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for THUMPD3P1 Gene

Publications for THUMPD3P1 Gene

No publications were found for THUMPD3P1 Gene.

No data available for Mastermind for THUMPD3P1 Gene

Products for THUMPD3P1 Gene

Sources for THUMPD3P1 Gene