Aliases for THUMPD1P1 Gene

Aliases for THUMPD1P1 Gene

  • THUMP Domain Containing 1 Pseudogene 1 2 3 5

External Ids for THUMPD1P1 Gene

Previous GeneCards Identifiers for THUMPD1P1 Gene

  • GC21M030276
  • GC21M015678

Summaries for THUMPD1P1 Gene

GeneCards Summary for THUMPD1P1 Gene

THUMPD1P1 (THUMP Domain Containing 1 Pseudogene 1) is a Pseudogene.

Additional gene information for THUMPD1P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for THUMPD1P1 Gene

Genomics for THUMPD1P1 Gene

GeneHancer (GH) Regulatory Elements for THUMPD1P1 Gene

Promoters and enhancers for THUMPD1P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH21J028903 Enhancer 0.4 FANTOM5 500.7 -0.1 -94 0.2 SNIP1 NFATC3 THUMPD1P1 CCT8 N6AMT1 MAP3K7CL lnc-USP16-14 lnc-LTN1-1
GH21J028921 Enhancer 0.7 Ensembl ENCODE 0.4 -18.8 -18814 1.7 SKI POLR2A RARA THRB EP300 NANOG RXRB RWDD2B lnc-LTN1-1 THUMPD1P1
GH21J028923 Enhancer 0.5 Ensembl 0.4 -20.1 -20133 0.2 PBX2 SMAD4 RCOR1 THRB TFAP4 RXRB ATF3 FOXA3 SP1 SOX13 lnc-LTN1-1 THUMPD1P1
GH21J028898 Enhancer 0.2 Ensembl 0.4 +5.1 5067 0.2 CCT8 THUMPD1P1 lnc-USP16-15 lnc-USP16-14
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around THUMPD1P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for THUMPD1P1 Gene

Genomic Locations for THUMPD1P1 Gene
chr21:28,901,756-28,903,768
(GRCh38/hg38)
Size:
2,013 bases
Orientation:
Minus strand
chr21:30,274,101-30,276,085
(GRCh37/hg19)
Size:
1,985 bases
Orientation:
Minus strand

Genomic View for THUMPD1P1 Gene

Genes around THUMPD1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
THUMPD1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for THUMPD1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for THUMPD1P1 Gene

Proteins for THUMPD1P1 Gene

Post-translational modifications for THUMPD1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for THUMPD1P1 Gene

Domains & Families for THUMPD1P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for THUMPD1P1 Gene

Function for THUMPD1P1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for THUMPD1P1 Gene

Localization for THUMPD1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for THUMPD1P1 Gene

Pathways & Interactions for THUMPD1P1 Gene

PathCards logo

SuperPathways for THUMPD1P1 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for THUMPD1P1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for THUMPD1P1 Gene

Drugs & Compounds for THUMPD1P1 Gene

No Compound Related Data Available

Transcripts for THUMPD1P1 Gene

mRNA/cDNA for THUMPD1P1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for THUMPD1P1 Gene

No ASD Table

Relevant External Links for THUMPD1P1 Gene

GeneLoc Exon Structure for
THUMPD1P1

Expression for THUMPD1P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for THUMPD1P1 Gene

genes like me logo Genes that share expression patterns with THUMPD1P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for THUMPD1P1 Gene

Orthologs for THUMPD1P1 Gene

Evolution for THUMPD1P1 Gene

ENSEMBL:
Gene Tree for THUMPD1P1 (if available)
TreeFam:
Gene Tree for THUMPD1P1 (if available)

No data available for Orthologs for THUMPD1P1 Gene

Paralogs for THUMPD1P1 Gene

No data available for Paralogs for THUMPD1P1 Gene

Variants for THUMPD1P1 Gene

Additional Variant Information for THUMPD1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
THUMPD1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for THUMPD1P1 Gene

Disorders for THUMPD1P1 Gene

No disorders were found for THUMPD1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for THUMPD1P1 Gene

Publications for THUMPD1P1 Gene

No publications were found for THUMPD1P1 Gene.

No data available for Mastermind for THUMPD1P1 Gene

Products for THUMPD1P1 Gene

Sources for THUMPD1P1 Gene