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Aliases for THRB-AS1 Gene

Subcategory (RNA class) for THRB-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for THRB-AS1 Gene

  • THRB Antisense RNA 1 2 3 5

External Ids for THRB-AS1 Gene

Summaries for THRB-AS1 Gene

GeneCards Summary for THRB-AS1 Gene

THRB-AS1 (THRB Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for THRB-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for THRB-AS1 Gene

Genomics for THRB-AS1 Gene

GeneHancer (GH) Regulatory Elements for THRB-AS1 Gene

Promoters and enhancers for THRB-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03I024489 Promoter/Enhancer 2.5 EPDnew Ensembl ENCODE dbSUPER 555 -0.5 -492 7.7 SMAD1 FOXA2 ZFP64 ARID4B SIN3A DMAP1 ZNF2 ZBTB7B YY1 POLR2B THRB-AS1 THRB RPL15 ENSG00000272554 THRB-IT1
GH03I024520 Promoter/Enhancer 1.7 Ensembl ENCODE dbSUPER 4.8 +27.8 27778 2.1 HDGF FOXA2 ZFP64 ZNF133 ARID4B SIN3A YBX1 DMAP1 GLI4 ZNF2 MIR4792 THRB-AS1 EIF3KP2
GH03I024519 Enhancer 1.3 Ensembl ENCODE dbSUPER 5.1 +25.9 25917 1.4 HDGF ARNT TCF12 GATA2 ATF7 NCOA1 GTF2B MBD2 SMARCA4 MYNN MIR4792 THRB-AS1 GC03M024503
GH03I024502 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +10.5 10505 4.1 HDAC1 PKNOX1 ATF1 ARNT BATF TCF12 ATF7 IKZF2 RUNX3 CREM GC03M024503 ENSG00000272554 THRB-AS1
GH03I024507 Enhancer 1 Ensembl ENCODE 0.4 +13.9 13889 1.4 PKNOX1 TAF9B INSM2 MZF1 ZNF2 ZNF366 SCRT2 ZNF391 FOS ZNF362 GC03M024503 MIR4792 THRB-AS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around THRB-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for THRB-AS1 Gene

Genomic Locations for THRB-AS1 Gene
chr3:24,494,087-24,681,711
(GRCh38/hg38)
Size:
187,625 bases
Orientation:
Plus strand
chr3:24,535,578-24,541,833
(GRCh37/hg19)

Genomic View for THRB-AS1 Gene

Genes around THRB-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
THRB-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for THRB-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for THRB-AS1 Gene

Proteins for THRB-AS1 Gene

Post-translational modifications for THRB-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for THRB-AS1 Gene

Domains & Families for THRB-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for THRB-AS1 Gene

Function for THRB-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for THRB-AS1 Gene

Localization for THRB-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for THRB-AS1 Gene

Pathways & Interactions for THRB-AS1 Gene

SuperPathways for THRB-AS1 Gene

No Data Available

Interacting Proteins for THRB-AS1 Gene

Gene Ontology (GO) - Biological Process for THRB-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for THRB-AS1 Gene

Drugs & Compounds for THRB-AS1 Gene

No Compound Related Data Available

Transcripts for THRB-AS1 Gene

mRNA/cDNA for THRB-AS1 Gene

(2) Additional mRNA sequences :
(11) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for THRB-AS1 Gene

THRB antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for THRB-AS1 Gene

No ASD Table

Relevant External Links for THRB-AS1 Gene

GeneLoc Exon Structure for
THRB-AS1
ECgene alternative splicing isoforms for
THRB-AS1

Expression for THRB-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for THRB-AS1 Gene

SOURCE GeneReport for Unigene cluster for THRB-AS1 Gene:

Hs.631912
genes like me logo Genes that share expression patterns with THRB-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for THRB-AS1 Gene

Orthologs for THRB-AS1 Gene

Evolution for THRB-AS1 Gene

ENSEMBL:
Gene Tree for THRB-AS1 (if available)
TreeFam:
Gene Tree for THRB-AS1 (if available)

No data available for Orthologs for THRB-AS1 Gene

Paralogs for THRB-AS1 Gene

No data available for Paralogs for THRB-AS1 Gene

Variants for THRB-AS1 Gene

Sequence variations from dbSNP and Humsavar for THRB-AS1 Gene

SNP ID Clin Chr 03 pos Variation AA Info Type
rs770619537 uncertain-significance, Thyroid Hormone Resistance 24,494,647(+) C/G intron_variant
rs886058295 uncertain-significance, Thyroid Hormone Resistance 24,494,773(+) TCTCT/TCT intron_variant
rs886058296 uncertain-significance, Thyroid Hormone Resistance 24,494,784(+) A/G intron_variant
rs1000287384 -- 24,495,207(+) G/A intron_variant
rs1000559990 -- 24,499,504(+) A/G intron_variant

Structural Variations from Database of Genomic Variants (DGV) for THRB-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv999384 CNV gain 25217958
nsv1012975 CNV gain 25217958
dgv74n68 CNV gain 17160897

Additional Variant Information for THRB-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
THRB-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for THRB-AS1 Gene

Disorders for THRB-AS1 Gene

Additional Disease Information for THRB-AS1

No disorders were found for THRB-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for THRB-AS1 Gene

Publications for THRB-AS1 Gene

No publications were found for THRB-AS1 Gene.

Products for THRB-AS1 Gene

Sources for THRB-AS1 Gene

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