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Aliases for THAP12P3 Gene
Aliases for THAP12P3 Gene
External Ids for THAP12P3 Gene
- HGNC: 39567
- Entrez Gene: 399774
- Ensembl: ENSG00000227972
Previous HGNC Symbols for THAP12P3 Gene
- PRKRIRP3
Summaries for THAP12P3 Gene
GeneCards Summary for THAP12P3 Gene
THAP12P3 (THAP Domain Containing 12 Pseudogene 3) is a Pseudogene.
Additional gene information for THAP12P3 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for THAP12P3 Gene
Genomics for THAP12P3 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for THAP12P3 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH10J052409 | Enhancer | 0.5 | ENCODE | 600.7 | -1.6 | -1598 | 0.2 | FOXA1 ATF7 PKNOX1 ZNF217 GATA3 ELF1 JUND TCF7L2 | THAP12P3 RF00017-665 PRKG1-AS1 DKK1 MBL2 | |
| GH10J052410 | Enhancer | 0.2 | Ensembl | 600.7 | -0.9 | -914 | 0.6 | THAP12P3 RF00017-665 PRKG1-AS1 DKK1 MBL2 | ||
| GH10J052753 | Promoter/Enhancer | 1.5 | EPDnew Ensembl ENCODE | 6.4 | +343.7 | 343702 | 2.8 | GATAD2A ATF7 TFE3 SOX13 RCOR2 RBFOX2 RXRB CEBPA ETS1 TCF7 | LNCAROD LOC105378305 THAP12P3 MBL2 piR-59193 lnc-DKK1-5 DKK1 | |
| GH10J052747 | Enhancer | 0.4 | Ensembl | 6.3 | +337.1 | 337087 | 0.6 | SOX13 ZBTB26 FOXA2 | THAP12P3 MBL2 LOC105378305 LNCAROD piR-59193 lnc-DKK1-5 DKK1 | |
| GH10J052741 | Enhancer | 0.3 | Ensembl | 8.3 | +330.5 | 330487 | 0.2 | CTCF | piR-59193 MBL2 THAP12P3 piR-33432-050 LNCAROD LOC105378305 lnc-DKK1-5 DKK1 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around THAP12P3 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for THAP12P3 Gene
Genomic Locations for THAP12P3 Gene
- chr10:52,411,014-52,413,539
- (GRCh38/hg38)
- Size:
- 2,526 bases
- Orientation:
- Plus strand
- chr10:54,170,895-54,173,255
- (GRCh37/hg19)
- Size:
- 2,361 bases
- Orientation:
- Plus strand
Genomic View for THAP12P3 Gene
Genes around THAP12P3 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 10q21.1 by HGNC
- 10q21.1 by Entrez Gene
- 10q21.1 by Ensembl
THAP12P3 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for THAP12P3 Gene
Proteins for THAP12P3 Gene
Post-translational modifications for THAP12P3 Gene
No Post-translational modifications
Antibody Products
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for THAP12P3
- Origene Custom Protein Services for THAP12P3
No data available for DME Specific Peptides for THAP12P3 Gene
Domains & Families for THAP12P3 Gene
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for THAP12P3 Gene
Function for THAP12P3 Gene
Phenotypes From GWAS Catalog for THAP12P3 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for THAP12P3 - Select products 50% OFF >
- * THAP12P3 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
- Browse CRISPR knockouts for THAP12P3
miRNA Products
Inhibitory RNA Products
Clone Products
- Applied Biological Materials (abm): Clones for THAP12P3 - Select products 50% OFF >
- * THAP12P3 as ready-to-use vector or virus: ORF | Lenti- | Retro- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for THAP12P3 Gene
Localization for THAP12P3 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for THAP12P3 Gene
Transcripts for THAP12P3 Gene
mRNA/cDNA for THAP12P3 Gene
- 1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000456373 2266 nts (view in UCSC)
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for THAP12P3 - Select products 50% OFF >
- * THAP12P3 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
- Browse CRISPR knockouts for THAP12P3
miRNA Products
Inhibitory RNA Products
Clone Products
- Applied Biological Materials (abm): Clones for THAP12P3 - Select products 50% OFF >
- * THAP12P3 as ready-to-use vector or virus: ORF | Lenti- | Retro- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
Relevant External Links for THAP12P3 Gene
- GeneLoc Exon Structure for
- THAP12P3
Expression for THAP12P3 Gene
No Expression Related Data Available
Primer Products
No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for THAP12P3 Gene
Orthologs for THAP12P3 Gene
No data available for Orthologs for THAP12P3 Gene
Paralogs for THAP12P3 Gene
No data available for Paralogs for THAP12P3 Gene
Variants for THAP12P3 Gene
Additional Variant Information for THAP12P3 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- THAP12P3
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for THAP12P3 Gene
Disorders for THAP12P3 Gene
No disorders were found for THAP12P3 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for THAP12P3 Gene
Publications for THAP12P3 Gene
No publications were found for THAP12P3 Gene.
No data available for Mastermind for THAP12P3 Gene
Products for THAP12P3 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for THAP12P3
- Origene Custom Protein Services for THAP12P3
- Browse OriGene Inhibitory RNA Products For THAP12P3
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for THAP12P3
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For THAP12P3
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for THAP12P3
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for THAP12P3
- Search GeneCopoeia for miRNA 3'UTR Target clone products for THAP12P3
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for THAP12P3
Sources for THAP12P3 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) Genetics Home Reference
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNACentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Signalway Antibody
- (175) Open Targets Platform
- (176) 5SRRNADB
- (177) snoDB
- (178) MirGeneDB