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Aliases for TFAMP2 Gene

Aliases for TFAMP2 Gene

  • Transcription Factor A, Mitochondrial Pseudogene 2 2 3
  • Transcription Factor 6-Like 3 (Mitochondrial Transcription Factor 1-Like) 2 3
  • Processed Pseudogene MtTFA 2 3
  • TCF6L3 3
  • MTTF1 3

External Ids for TFAMP2 Gene

Previous HGNC Symbols for TFAMP2 Gene

  • TCF6L3

Previous GeneCards Identifiers for TFAMP2 Gene

  • GC11M109282
  • GC11M109776

Summaries for TFAMP2 Gene

GeneCards Summary for TFAMP2 Gene

TFAMP2 (Transcription Factor A, Mitochondrial Pseudogene 2) is a Pseudogene.

Additional gene information for TFAMP2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TFAMP2 Gene

Genomics for TFAMP2 Gene

GeneHancer (GH) Regulatory Elements for TFAMP2 Gene

Promoters and enhancers for TFAMP2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11I109945 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.3 -38.6 -38642 1.4 ATF1 SMAD1 ARID4B SIN3A IRF4 E2F8 ARID2 ZNF207 ZNF143 ATF7 LOC105369484 ZC3H12C TFAMP2
GH11I109913 Enhancer 0.7 ENCODE 0.4 -7.0 -6971 2.3 JUN BACH1 CEBPG FOSL1 GATA3 ZNF316 NFE2 TRIM24 FOS CEBPB ZC3H12C TFAMP2 LOC105369484
GH11I109939 Enhancer 0.9 Ensembl ENCODE 0.3 -31.5 -31534 0.4 CTCF ZNF654 NFIA TRIM22 REST RAD21 RFX5 CC2D1A MEF2D NFIC LOC105369484 TFAMP2
GH11I109940 Enhancer 0.8 ENCODE 0.3 -33.0 -32970 1.3 HDAC1 PKNOX1 ATF1 NFRKB CHAMP1 FOS CREM ZNF592 SP1 ATF4 ZC3H12C LOC105369484 TFAMP2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around TFAMP2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TFAMP2 Gene

Genomic Locations for TFAMP2 Gene
chr11:109,905,922-109,907,866
(GRCh38/hg38)
Size:
1,945 bases
Orientation:
Minus strand
chr11:109,776,655-109,778,599
(GRCh37/hg19)

Genomic View for TFAMP2 Gene

Genes around TFAMP2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TFAMP2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TFAMP2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TFAMP2 Gene

Proteins for TFAMP2 Gene

Post-translational modifications for TFAMP2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TFAMP2 Gene

Domains & Families for TFAMP2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TFAMP2 Gene

Function for TFAMP2 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TFAMP2 Gene

Localization for TFAMP2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TFAMP2 Gene

Pathways & Interactions for TFAMP2 Gene

SuperPathways for TFAMP2 Gene

No Data Available

Interacting Proteins for TFAMP2 Gene

Gene Ontology (GO) - Biological Process for TFAMP2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TFAMP2 Gene

Drugs & Compounds for TFAMP2 Gene

No Compound Related Data Available

Transcripts for TFAMP2 Gene

mRNA/cDNA for TFAMP2 Gene

(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TFAMP2 Gene

No ASD Table

Relevant External Links for TFAMP2 Gene

GeneLoc Exon Structure for
TFAMP2
ECgene alternative splicing isoforms for
TFAMP2

Expression for TFAMP2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TFAMP2 Gene

NURSA nuclear receptor signaling pathways regulating expression of TFAMP2 Gene:

TFAMP2
genes like me logo Genes that share expression patterns with TFAMP2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TFAMP2 Gene

Orthologs for TFAMP2 Gene

Evolution for TFAMP2 Gene

ENSEMBL:
Gene Tree for TFAMP2 (if available)
TreeFam:
Gene Tree for TFAMP2 (if available)

No data available for Orthologs for TFAMP2 Gene

Paralogs for TFAMP2 Gene

No data available for Paralogs for TFAMP2 Gene

Variants for TFAMP2 Gene

Additional Variant Information for TFAMP2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TFAMP2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TFAMP2 Gene

Disorders for TFAMP2 Gene

No disorders were found for TFAMP2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TFAMP2 Gene

Publications for TFAMP2 Gene

  1. Human mitochondrial transcription factor A (mtTFA): gene structure and characterization of related pseudogenes. (PMID: 12095695) Reyes A … Gadaleta G (Gene 2002) 3 58

Products for TFAMP2 Gene

Sources for TFAMP2 Gene

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