TEX54 Gene (Protein Coding)

Testis Expressed 54

GC11M063895
GIFtS:
7
See more...

Aliases for TEX54 Gene

Aliases for TEX54 Gene

  • Testis Expressed 54 2 3 5
  • Testis-Expressed Protein 54 4
  • TEX54 5

External Ids for TEX54 Gene

Previous GeneCards Identifiers for TEX54 Gene

  • GC11M062963
  • GC11M062993
  • GC11M063020
  • GC11M063083
  • GC11M062834
  • GC11M062835
  • GC11M063445

Summaries for TEX54 Gene

GeneCards Summary for TEX54 Gene

TEX54 (Testis Expressed 54) is a Protein Coding gene.

Additional gene information for TEX54 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for TEX54 Gene

Genomics for TEX54 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for TEX54 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH11J062830 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 250.7 +0.4 351 4.6 SP1 NR2C1 MNT DEK SMAD5 MBD2 ZNF217 POLR2A BRCA1 BHLHE40 LOC105369332 STX5 TEX54 SNHG1 NXF1 CSKMT MTA2 TTC9C TAF6L GNG3
GH11J062838 Promoter/Enhancer 2.5 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 -7.9 -7919 5 ARID3A ZSCAN16 CHD2 SP1 ZBTB10 BCL11A MXD4 FEZF1 CEBPA SIX5 WDR74 RF00004-024 RNU2-2P lnc-SLC3A2-5 lnc-SLC3A2-6 CSKMT SNHG1 NXF1 MTA2 GANAB
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around TEX54 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for TEX54 Gene

Latest Assembly
chr11:62,832,319-62,832,803
(GRCh38/hg38)
Size:
485 bases
Orientation:
Minus strand

Genomic View for TEX54 Gene

Genes around TEX54 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TEX54 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TEX54 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

No data available for RefSeq DNA sequence for TEX54 Gene

Proteins for TEX54 Gene

Products:

  1. Antibodies for research
  2. Protein products for research
  3. Assay products for research

  • Protein details for TEX54 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    A0A1B0GVG6-TEX54_HUMAN
    Recommended name:
    Testis-expressed protein 54
    Protein Accession:
    A0A1B0GVG6

    Protein attributes for TEX54 Gene

    Size:
    124 amino acids
    Molecular mass:
    14093 Da
    Quaternary structure:
    No Data Available

neXtProt entry for TEX54 Gene

Post-translational modifications for TEX54 Gene

No Post-translational modifications

Other Protein References for TEX54 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for TEX54 Gene

Domains & Families for TEX54 Gene

Gene Families for TEX54 Gene

Human Protein Atlas (HPA):
  • Predicted intracellular proteins

Protein Domains for TEX54 Gene

ProtoNet:
genes like me logo Genes that share domains with TEX54: view

No data available for Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for TEX54 Gene

Function for TEX54 Gene

Products:

  1. Animal Models for research
  2. CRISPR products for research
  3. miRNA products for research
  4. Inhibitory RNAs for research
  5. Clone products for research
  6. Cell Lines for research

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TEX54 Gene

Localization for TEX54 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TEX54 Gene

Pathways & Interactions for TEX54 Gene

PathCards logo

SuperPathways for TEX54 Gene

No Data Available

Interacting Proteins for TEX54 Gene

Gene Ontology (GO) - Biological Process for TEX54 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TEX54 Gene

Drugs & Compounds for TEX54 Gene

Products:

  1. Drug products for research
No Compound Related Data Available

Transcripts for TEX54 Gene

Products:

  1. CRISPR products for research
  2. miRNA products for research
  3. Inhibitory RNAs for research
  4. Clone products for research

mRNA/cDNA for TEX54 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TEX54 Gene

No ASD Table

Relevant External Links for TEX54 Gene

GeneLoc Exon Structure for
TEX54

Expression for TEX54 Gene

Products:

  1. Primer products for research

mRNA Expression by UniProt/SwissProt for TEX54 Gene:

A0A1B0GVG6-TEX54_HUMAN
Tissue specificity: Expressed in Testis.

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TEX54 Gene

Orthologs for TEX54 Gene

Evolution for TEX54 Gene

ENSEMBL:
Gene Tree for TEX54 (if available)
TreeFam:
Gene Tree for TEX54 (if available)

No data available for Orthologs for TEX54 Gene

Paralogs for TEX54 Gene

No data available for Paralogs for TEX54 Gene

Variants for TEX54 Gene

Additional Variant Information for TEX54 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TEX54

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TEX54 Gene

Disorders for TEX54 Gene

No disorders were found for TEX54 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TEX54 Gene

Publications for TEX54 Gene

  1. Human chromosome 11 DNA sequence and analysis including novel gene identification. (PMID: 16554811) Taylor TD … Sakaki Y (Nature 2006) 4

No data available for Mastermind for TEX54 Gene

Products for TEX54 Gene

Sources for TEX54 Gene