TEX54 Gene (Protein Coding)

Testis Expressed 54

GC11M063020
GIFtS:
8

Aliases for TEX54 Gene

Aliases for TEX54 Gene

  • Testis Expressed 54 2 3 5
  • Testis-Expressed Protein 54 4

External Ids for TEX54 Gene

Previous GeneCards Identifiers for TEX54 Gene

  • GC11M062963
  • GC11M062993
  • GC11M062834
  • GC11M062835

Summaries for TEX54 Gene

GeneCards Summary for TEX54 Gene

TEX54 (Testis Expressed 54) is a Protein Coding gene.

Additional gene information for TEX54 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for TEX54 Gene

Genomics for TEX54 Gene

GeneHancer (GH) Regulatory Elements for TEX54 Gene

Promoters and enhancers for TEX54 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH11J062830 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 750.6 +0.4 351 4.6 FOXK2 SP1 ZBTB40 RBPJ SMARCE1 POLR2A CEBPZ USF2 ATF1 FOS STX5 ENSG00000256690 LOC105369332 TEX54 SNHG1 NXF1 WDR74 CSKMT TTC9C UBXN1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around TEX54 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TEX54 Gene

Genomic Locations for TEX54 Gene
chr11:62,832,319-62,832,803
(GRCh38/hg38)
Size:
485 bases
Orientation:
Minus strand

Genomic View for TEX54 Gene

Genes around TEX54 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TEX54 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TEX54 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

No data available for RefSeq DNA sequence for TEX54 Gene

Proteins for TEX54 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

  • Protein details for TEX54 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    A0A1B0GVG6-TEX54_HUMAN
    Recommended name:
    Testis-expressed protein 54
    Protein Accession:
    A0A1B0GVG6

    Protein attributes for TEX54 Gene

    Size:
    124 amino acids
    Molecular mass:
    14093 Da
    Quaternary structure:
    No Data Available

neXtProt entry for TEX54 Gene

Post-translational modifications for TEX54 Gene

No Post-translational modifications

Other Protein References for TEX54 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for TEX54 Gene

Domains & Families for TEX54 Gene

Protein Domains for TEX54 Gene

ProtoNet:
genes like me logo Genes that share domains with TEX54: view

No data available for Gene Families , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for TEX54 Gene

Function for TEX54 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TEX54 Gene

Localization for TEX54 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TEX54 Gene

Pathways & Interactions for TEX54 Gene

PathCards logo

SuperPathways for TEX54 Gene

No Data Available

Interacting Proteins for TEX54 Gene

Gene Ontology (GO) - Biological Process for TEX54 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TEX54 Gene

Drugs & Compounds for TEX54 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for TEX54 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for TEX54 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TEX54 Gene

No ASD Table

Relevant External Links for TEX54 Gene

GeneLoc Exon Structure for
TEX54
ECgene alternative splicing isoforms for
TEX54

Expression for TEX54 Gene

Products:

  1. Primer

mRNA Expression by UniProt/SwissProt for TEX54 Gene:

A0A1B0GVG6-TEX54_HUMAN
Tissue specificity: Expressed in Testis.

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TEX54 Gene

Orthologs for TEX54 Gene

Evolution for TEX54 Gene

ENSEMBL:
Gene Tree for TEX54 (if available)
TreeFam:
Gene Tree for TEX54 (if available)

No data available for Orthologs for TEX54 Gene

Paralogs for TEX54 Gene

No data available for Paralogs for TEX54 Gene

Variants for TEX54 Gene

Additional Variant Information for TEX54 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TEX54

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TEX54 Gene

Disorders for TEX54 Gene

No disorders were found for TEX54 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TEX54 Gene

Publications for TEX54 Gene

  1. Human chromosome 11 DNA sequence and analysis including novel gene identification. (PMID: 16554811) Taylor TD … Sakaki Y (Nature 2006) 4 56

No data available for External Links for TEX54 Gene

Products for TEX54 Gene

Sources for TEX54 Gene