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Aliases for TEX52 Gene

Aliases for TEX52 Gene

  • Testis Expressed 52 2 3 5
  • Testis-Expressed Protein 52 3 4

External Ids for TEX52 Gene

Summaries for TEX52 Gene

GeneCards Summary for TEX52 Gene

TEX52 (Testis Expressed 52) is a Protein Coding gene.

Additional gene information for TEX52 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TEX52 Gene

Genomics for TEX52 Gene

GeneHancer (GH) Regulatory Elements for TEX52 Gene

Promoters and enhancers for TEX52 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J002856 Enhancer 0.6 Ensembl ENCODE 600.7 +0.1 142 0.7 RFX1 ZNF639 POLR2A TEX52 RHNO1 GC12P002844 ITFG2
GH12J002858 Enhancer 0.5 Ensembl 600.7 -1.6 -1586 0.4 GLIS2 POLR2A WT1 GLIS1 TEX52 RHNO1 FOXM1 ITFG2
GH12J002853 Enhancer 0.8 Ensembl ENCODE 0.7 +3.6 3587 0.7 CTCF IKZF1 PRDM10 REST NFIC RAD21 ZNF654 NFIA FOXP1 ZNF143 TEX52 GC12P002844 ITFG2
GH12J002849 Enhancer 1 Ensembl ENCODE 0.4 +7.7 7742 2.1 MAFK SP1 SP5 HMG20B RXRB ZSCAN4 RCOR2 ZNF316 SOX13 SMARCC2 TEX52 GC12P002844 ITFG2
GH12J002854 Enhancer 0.6 Ensembl ENCODE 0.7 +2.1 2053 1.2 ZNF600 ZNF639 ZBTB11 RHNO1 TEX52 GC12P002844 ITFG2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around TEX52 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TEX52 Gene

Genomic Locations for TEX52 Gene
chr12:2,848,243-2,857,215
(GRCh38/hg38)
Size:
8,973 bases
Orientation:
Minus strand
chr12:2,958,397-2,966,213
(GRCh37/hg19)
Size:
7,817 bases
Orientation:
Minus strand

Genomic View for TEX52 Gene

Genes around TEX52 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TEX52 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TEX52 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TEX52 Gene

Proteins for TEX52 Gene

  • Protein details for TEX52 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    A6NCN8-TEX52_HUMAN
    Recommended name:
    Testis-expressed protein 52
    Protein Accession:
    A6NCN8

    Protein attributes for TEX52 Gene

    Size:
    305 amino acids
    Molecular mass:
    35334 Da
    Quaternary structure:
    No Data Available

neXtProt entry for TEX52 Gene

Post-translational modifications for TEX52 Gene

No Post-translational modifications

Other Protein References for TEX52 Gene

No data available for DME Specific Peptides for TEX52 Gene

Domains & Families for TEX52 Gene

Protein Domains for TEX52 Gene

InterPro:
ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TEX52: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TEX52 Gene

Function for TEX52 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TEX52 Gene

Localization for TEX52 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TEX52 Gene

Pathways & Interactions for TEX52 Gene

PathCards logo

SuperPathways for TEX52 Gene

No Data Available

Interacting Proteins for TEX52 Gene

Gene Ontology (GO) - Biological Process for TEX52 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TEX52 Gene

Drugs & Compounds for TEX52 Gene

No Compound Related Data Available

Transcripts for TEX52 Gene

mRNA/cDNA for TEX52 Gene

(2) REFSEQ mRNAs :
(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TEX52 Gene

No ASD Table

Relevant External Links for TEX52 Gene

GeneLoc Exon Structure for
TEX52
ECgene alternative splicing isoforms for
TEX52

Expression for TEX52 Gene

mRNA Expression by UniProt/SwissProt for TEX52 Gene:

A6NCN8-TEX52_HUMAN
Tissue specificity: Expressed in Testis.

Primer Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TEX52 Gene

Orthologs for TEX52 Gene

This gene was present in the common ancestor of mammals.

Orthologs for TEX52 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia LOC101059794 34
  • 99.28 (n)
dog
(Canis familiaris)
Mammalia LOC102155323 34
  • 81.67 (n)
cow
(Bos Taurus)
Mammalia LOC782076 34
  • 79.14 (n)
mouse
(Mus musculus)
Mammalia 4933413G19Rik 34
  • 75.92 (n)
Tex52 17
rat
(Rattus norvegicus)
Mammalia LOC100362909 34
  • 75 (n)
Species where no ortholog for TEX52 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for TEX52 Gene

ENSEMBL:
Gene Tree for TEX52 (if available)
TreeFam:
Gene Tree for TEX52 (if available)

Paralogs for TEX52 Gene

No data available for Paralogs for TEX52 Gene

Variants for TEX52 Gene

Sequence variations from dbSNP and Humsavar for TEX52 Gene

SNP ID Clin Chr 12 pos Variation AA Info Type
rs1000069714 -- 2,851,019(-) T/A intron_variant
rs1000318680 -- 2,850,913(-) T/C intron_variant
rs1000746033 -- 2,854,224(-) C/T intron_variant
rs1000930747 -- 2,849,619(-) C/A intron_variant
rs1001014559 -- 2,852,469(-) C/A/T intron_variant

Additional Variant Information for TEX52 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TEX52

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TEX52 Gene

Disorders for TEX52 Gene

No disorders were found for TEX52 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TEX52 Gene

Publications for TEX52 Gene

  1. The finished DNA sequence of human chromosome 12. (PMID: 16541075) Scherer SE … Baylor College of Medicine Human Genome Sequencing Center Sequence Production Team (Nature 2006) 4 58

No data available for External Links for TEX52 Gene

Products for TEX52 Gene

Sources for TEX52 Gene

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