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Aliases for TET2-AS1 Gene

Subcategory (RNA class) for TET2-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for TET2-AS1 Gene

  • TET2 Antisense RNA 1 2 3 5
  • TET2 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for TET2-AS1 Gene

Previous GeneCards Identifiers for TET2-AS1 Gene

  • GC04M106093

Summaries for TET2-AS1 Gene

GeneCards Summary for TET2-AS1 Gene

TET2-AS1 (TET2 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for TET2-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TET2-AS1 Gene

Genomics for TET2-AS1 Gene

GeneHancer (GH) Regulatory Elements for TET2-AS1 Gene

Promoters and enhancers for TET2-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04I105352 Enhancer 1 Ensembl ENCODE 550.8 +0.1 51 1.3 PKNOX1 ATF1 TAF9B BATF IRF4 ETV6 ATF7 RUNX3 CREM JUNB TET2-AS1 PPA2 RN7SL89P
GH04I105351 Enhancer 0.5 Ensembl 550.8 +1.8 1780 0.2 PRDM6 BCL11A ZNF24 BATF SPI1 TET2-AS1 RN7SL89P
GH04I105144 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 11.8 +206.0 205951 5.2 HDGF PKNOX1 ATF1 FOXA2 ARNT SIN3A YBX1 ZNF48 YY1 GLIS2 TET2 EEF1A1P9 TET2-AS1 ENSG00000250740 PPA2 RN7SL89P
GH04I105471 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 10.9 -120.1 -120131 3.4 HDGF PKNOX1 CLOCK FOXA2 ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 PPA2 TET2-AS1 RNU6-553P
GH04I105149 Enhancer 1.1 FANTOM5 ENCODE dbSUPER 11.8 +202.8 202809 0.9 RXRA HLF CHD1 MAX CEBPB CEBPG ZNF644 RAD21 JUND CEBPA TET2 TET2-AS1 PPA2 RN7SL89P
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around TET2-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TET2-AS1 Gene

Genomic Locations for TET2-AS1 Gene
181,528 bases
Minus strand

Genomic View for TET2-AS1 Gene

Genes around TET2-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TET2-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TET2-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TET2-AS1 Gene

Proteins for TET2-AS1 Gene

Post-translational modifications for TET2-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TET2-AS1 Gene

Domains & Families for TET2-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TET2-AS1 Gene

Function for TET2-AS1 Gene

Phenotypes From GWAS Catalog for TET2-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TET2-AS1 Gene

Localization for TET2-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TET2-AS1 Gene

Pathways & Interactions for TET2-AS1 Gene

SuperPathways for TET2-AS1 Gene

No Data Available

Interacting Proteins for TET2-AS1 Gene

Gene Ontology (GO) - Biological Process for TET2-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for TET2-AS1 Gene

Drugs & Compounds for TET2-AS1 Gene

No Compound Related Data Available

Transcripts for TET2-AS1 Gene

mRNA/cDNA for TET2-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TET2-AS1 Gene

No ASD Table

Relevant External Links for TET2-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for TET2-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TET2-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for TET2-AS1 Gene

This gene is overexpressed in Esophagus - Muscularis (x4.0).
genes like me logo Genes that share expression patterns with TET2-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TET2-AS1 Gene

Orthologs for TET2-AS1 Gene

Evolution for TET2-AS1 Gene

Gene Tree for TET2-AS1 (if available)
Gene Tree for TET2-AS1 (if available)

No data available for Orthologs for TET2-AS1 Gene

Paralogs for TET2-AS1 Gene

No data available for Paralogs for TET2-AS1 Gene

Variants for TET2-AS1 Gene

Sequence variations from dbSNP and Humsavar for TET2-AS1 Gene

SNP ID Clin Chr 04 pos Variation AA Info Type
rs869025296 uncertain-significance, Familial cancer of breast 105,236,073(-) G/C intron_variant
rs111678678 not-provided, not specified 105,237,058(-) C/T intron_variant
rs111948941 not-provided, not specified 105,234,042(-) C/T intron_variant
rs114619974 not-provided, not specified 105,234,376(-) G/A intron_variant
rs12498609 not-provided, not specified 105,234,028(-) C/G/T intron_variant

Additional Variant Information for TET2-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TET2-AS1 Gene

Disorders for TET2-AS1 Gene

Additional Disease Information for TET2-AS1

No disorders were found for TET2-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TET2-AS1 Gene

Publications for TET2-AS1 Gene

No publications were found for TET2-AS1 Gene.

Products for TET2-AS1 Gene

Sources for TET2-AS1 Gene

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