Aliases for TEN1-CDK3 Gene
Subcategory (RNA class) for TEN1-CDK3 Gene
ncRNA
Quality Score for this RNA gene is
3
Aliases for TEN1-CDK3 Gene
External Ids for TEN1-CDK3 Gene
- HGNC: 44420
- Entrez Gene: 100529145
- Ensembl: ENSG00000261408
Previous GeneCards Identifiers for TEN1-CDK3 Gene
- GC17U901665
- GC17P073981
Summaries for TEN1-CDK3 Gene
-
This locus represents naturally occurring read-through transcription between the neighboring TEN1 telomerase capping complex subunit homolog (S. cerevisiae) and cyclin-dependent kinase 3 (CDK3) genes. The read-through transcript is a candidate for nonsense-mediated mRNA decay (NMD), and is therefore unlikely to produce a protein product. [provided by RefSeq, Oct 2011]
GeneCards Summary for TEN1-CDK3 Gene
TEN1-CDK3 (TEN1-CDK3 Readthrough (NMD Candidate)) is an RNA Gene, and is affiliated with the ncRNA class. Gene Ontology (GO) annotations related to this gene include transferase activity, transferring phosphorus-containing groups and protein tyrosine kinase activity. An important paralog of this gene is TEN1.
Additional gene information for TEN1-CDK3 Gene
No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TEN1-CDK3 Gene
Genomics for TEN1-CDK3 Gene
GeneHancer (GH) Regulatory Elements for TEN1-CDK3 Gene
Promoters and enhancers for TEN1-CDK3 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data dump
GeneHancers around TEN1-CDK3 on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Locations for TEN1-CDK3 Gene
Genomic Locations for TEN1-CDK3 Gene
- chr17:75,979,217-76,005,999
- (GRCh38/hg38)
- Size:
- 26,783 bases
- Orientation:
- Plus strand
- chr17:73,975,298-74,002,080
- (GRCh37/hg19)
Genomic View for TEN1-CDK3 Gene
Genes around TEN1-CDK3 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 17q25.1 by Ensembl
- 17q25.1 by Entrez Gene
- 17q25.1 by HGNC
TEN1-CDK3 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for TEN1-CDK3 Gene
Proteins for TEN1-CDK3 Gene
Protein Expression for TEN1-CDK3 Gene
Post-translational modifications for TEN1-CDK3 Gene
No Post-translational modifications
Other Protein References for TEN1-CDK3 Gene
- ENSEMBL proteins:
Antibody Products
- Search GeneTex for Antibodies for TEN1-CDK3
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for TEN1-CDK3
- Origene Custom Protein Services for TEN1-CDK3
- Search GeneTex for Proteins for TEN1-CDK3
No data available for DME Specific Peptides for TEN1-CDK3 Gene
Domains & Families for TEN1-CDK3 Gene
Gene Families for TEN1-CDK3 Gene
- Human Protein Atlas (HPA):
-
- Predicted intracellular proteins
Graphical View of Domain Structure for InterPro Entry
No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TEN1-CDK3 Gene
Function for TEN1-CDK3 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for TEN1-CDK3
-
- Search ViGene Biosciences for TEN1-CDK3
CRISPR Products
- Browse CRISPR knockouts for TEN1-CDK3
miRNA Products
- Search ViGene Biosciences for TEN1-CDK3
Inhibitory RNA Products
- Search ViGene Biosciences for TEN1-CDK3
Clone Products
- GenScript: Custom all cDNA clones Services for TEN1-CDK3
- VectorBuilder custom plasmid, inducible vectors for TEN1-CDK3
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for TEN1-CDK3
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TEN1-CDK3 Gene
Localization for TEN1-CDK3 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TEN1-CDK3 Gene
Transcripts for TEN1-CDK3 Gene
mRNA/cDNA for TEN1-CDK3 Gene
- (2) Ensembl transcripts including schematic representations, and UCSC links where relevant :
CRISPR Products
- Browse CRISPR knockouts for TEN1-CDK3
miRNA Products
- Search ViGene Biosciences for TEN1-CDK3
Inhibitory RNA Products
- Search ViGene Biosciences for TEN1-CDK3
Clone Products
- GenScript: Custom all cDNA clones Services for TEN1-CDK3
- VectorBuilder custom plasmid, inducible vectors for TEN1-CDK3
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for TEN1-CDK3
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Expression for TEN1-CDK3 Gene
This gene is overexpressed in Heart (37.8) and Brain (31.2).
Primer Products
Gene Expression Assay Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TEN1-CDK3 Gene
Orthologs for TEN1-CDK3 Gene
No data available for Orthologs for TEN1-CDK3 Gene
Paralogs for TEN1-CDK3 Gene
Variants for TEN1-CDK3 Gene
| SNP ID | Clin | Chr 17 pos | Variation | AA Info | Type |
|---|---|---|---|---|---|
| rs145082938 | likely-benign, uncertain-significance, not provided, Pseudoneonatal adrenoleukodystrophy | 75,978,994(+) | G/A | upstream_transcript_variant | |
| rs3760132 | likely-benign, Pseudoneonatal adrenoleukodystrophy | 75,979,390(+) | C/G/T | non_coding_transcript_variant | |
| rs543914514 | uncertain-significance, Pseudoneonatal adrenoleukodystrophy | 75,979,259(+) | A/T | non_coding_transcript_variant | |
| rs575138461 | uncertain-significance, Pseudoneonatal adrenoleukodystrophy | 75,979,246(+) | G/A | non_coding_transcript_variant | |
| rs777937235 | likely-pathogenic, Pseudoneonatal adrenoleukodystrophy | 75,978,627(+) | C/G | upstream_transcript_variant |
Additional Variant Information for TEN1-CDK3 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- TEN1-CDK3
SNP Genotyping and Copy Number Assay Products
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for TEN1-CDK3 Gene
Disorders for TEN1-CDK3 Gene
Additional Disease Information for TEN1-CDK3
No disorders were found for TEN1-CDK3 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TEN1-CDK3 Gene
Publications for TEN1-CDK3 Gene
- Expression of conjoined genes: another mechanism for gene regulation in eukaryotes. (PMID: 20967262) Prakash T … Taylor TD (PloS one 2010) 3 58
- Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58
Products for TEN1-CDK3 Gene
- Browse R&D Systems for Antibodies
- Browse R&D Systems for Human Recombinant Proteins
- Browse R&D Systems for biochemical assays
- Browse Human Proteins and Enzymes
- Browse Primary Antibodies
- Browse Proteins and Enzymes
- Browse ELISAs
- Browse Activity Assays
- Browse cDNA Clones
- Browse Cell Culture Products
- Browse Cell Selection and Detection Kits
- Browse DNA Damage and Repair Kits
- Browse ELISpot/FluoroSpot Kits and Development Modules
- Browse Flow Cytometry Kits
- Browse Immunoprecipitation Assays
- Browse Luminex Assays
- Browse Peptides
- Browse Proteome Profiler Antibody Arrays
- Browse Small Molecules
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for TEN1-CDK3
- Origene Custom Protein Services for TEN1-CDK3
- Browse OriGene Inhibitory RNA Products For TEN1-CDK3
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for TEN1-CDK3
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For TEN1-CDK3
- GenScript: Custom all cDNA clones Services for TEN1-CDK3
- GenScript Custom Purified and Recombinant Proteins Services for TEN1-CDK3
- GenScript Custom Assay Services for TEN1-CDK3
- GenScript Custom overexpressing Cell Line Services for TEN1-CDK3
- Browse GenScript CRISPR for TEN1-CDK3
- Design optimal peptide antigens
- CloneReady with Over 120,000 Genes
- Gene Synthesis: Any Gene in Any Vector
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- Browse Sino Biological cDNA Clones
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- Sino Biological Transfection Reagent
- Sino Biological Anti-His Tag Antibody
- Browse Antibodies at Cloud-Clone Corp.
- Browse Proteins at Cloud-Clone Corp.
- Browse Assay Kits at Cloud-Clone Corp.
- Browse Knockouts at Cloud-Clone Corp.
- Browse Knockins at Cloud-Clone Corp.
- Cloud-Clone Corp. disease models service
- Browse cDNA clones at Cloud-Clone Corp.
- Browse primers at Cloud-Clone Corp.
- Cloud-Clone Corp. primary cells service
- Cyagen custom Knockout/knockin (KOKI) mouse models for TEN1-CDK3
- VectorBuilder custom plasmid, inducible vectors for TEN1-CDK3
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for TEN1-CDK3
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Search GeneTex for Antibodies for TEN1-CDK3
- Search GeneTex for Proteins for TEN1-CDK3
- Search ViGene Biosciences for TEN1-CDK3
Sources for TEN1-CDK3 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) ASD
- (29) ECgene
- (30) GeneAnnot
- (31) CGAP SAGE
- (32) SOURCE
- (33) HomoloGene
- (34) PanEnsembl
- (35) euGenes
- (36) SGD
- (37) FlyBase
- (38) WormBase
- (39) Pseudogene
- (40) DGV
- (41) dbSNP
- (42) GenAtlas
- (43) HGMD
- (44) GAD
- (45) BGMUT
- (46) HuGE
- (47) Atlas
- (48) Cell Signaling Technology
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
- (59) R&D Systems
- (60) TGDB
- (61) Tocris
- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) Cloud-Clone Corp.
- (69) OCA
- (70) Proteopedia
- (71) MOPED
- (72) neXtProt
- (73) Reactome
- (74) GeneGo (Thomson Reuters)
- (75) fRNAdb
- (76) DISEASES
- (77) SIMAP
- (78) GenomeRNAi
- (79) LifeMap
- (80) miRTarBase
- (81) MalaCards
- (82) Invitrogen
- (83) BitterDB
- (84) Vector BioLabs
- (85) ESI-BIO
- (86) RefSeq
- (87) BioSystems
- (88) MaxQB
- (89) IUPHAR
- (90) BioGPS
- (91) Illumina
- (92) COMPARTMENTS
- (93) HOMER
- (94) PaxDb
- (95) ApexBio
- (96) Addgene
- (97) antibodies-online
- (98) CYP
- (99) NONCODE
- (100) SwitchGear Genomics
- (101) TreeFam
- (102) PathCards
- (103) GeneReviews
- (104) GeneTex
- (105) Taconic Biosciences
- (106) GTEx
- (107) ProteomicsDB
- (108) SCBT
- (109) DGIdb
- (110) ClinicalTrials
- (111) FDA Approved Drugs
- (112) RVIS
- (113) SIGNOR
- (114) diseasecard
- (115) NIH Rare Diseases
- (116) Orphanet
- (117) UMLS
- (118) GTR
- (119) Disease Ontology
- (120) Genetics Home Reference
- (121) MeSH
- (122) MedlinePlus
- (123) CDC
- (124) NINDS
- (125) NCBI Bookshelf
- (126) ClinVar
- (127) Gene Damage Index
- (128) ViGene Biosciences
- (129) HPO
- (130) UDN
- (131) VISTA
- (132) FANTOM5
- (133) ENCODE
- (134) ProSci
- (135) Horizon
- (136) NURSA
- (137) IID
- (138) Cyagen
- (139) VectorBuilder
- (140) SNPedia
- (141) BRCA Exchange
- (142) St John's Lab
- (143) CIViC
- (144) ProteoGenix
- (145) dbSUPER
- (146) TISSUES
- (147) Gene ORGANizer
- (148) abm
- (149) CrownBio
- (150) Human Protein Atlas
- (151) GWAS Catalog
- (152) Monarch Initiative
- (153) DataMed
- (154) HumanCyc
- (155) genomics-online
- (156) UCNEbase
- (157) EPDnew
- (158) Applied Biosystems
