Aliases for TEDDM2P Gene

Aliases for TEDDM2P Gene

  • Transmembrane Epididymal Protein 2, Pseudogene 2 3 5
  • Transmembrane Epididymal Protein 1 Pseudogene 1 2 3
  • TEDDM1P1 3
  • TEDDM2P 5

External Ids for TEDDM2P Gene

Previous HGNC Symbols for TEDDM2P Gene

  • TEDDM1P1

Summaries for TEDDM2P Gene

GeneCards Summary for TEDDM2P Gene

TEDDM2P (Transmembrane Epididymal Protein 2, Pseudogene) is a Pseudogene.

Additional gene information for TEDDM2P Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for TEDDM2P Gene

Genomics for TEDDM2P Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for TEDDM2P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J182445 Enhancer 0.7 Ensembl 0.7 +4.7 4655 0.5 CTCF ARNT REST NBN TRIM22 SMC3 RAD21 MLLT1 FOXK2 ZNF143 TEDDM2P piR-56497-008 HSALNG0008918 RGSL1 RNASEL
GH01J182444 Enhancer 0.3 Ensembl 0.7 +3.0 3024 0.4 CTCF TEDDM2P piR-56497-008 HSALNG0008918 RGSL1 RNASEL
GH01J182453 Enhancer 0.4 Ensembl 0.4 +12.2 12224 0.8 CEBPB RXRA ATF3 CEBPG piR-56497-008 TEDDM2P HSALNG0008918 RGSL1 RNASEL
GH01J182450 Promoter 0.3 EPDnew 0.4 +8.6 8550 0.1 RGSL1 TEDDM2P piR-56497-008 HSALNG0008918 RNASEL
GH01J182451 Enhancer 0.2 Ensembl 0.4 +8.8 8824 0.4 TEDDM2P piR-56497-008 HSALNG0008918 RGSL1 RNASEL
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around TEDDM2P on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for TEDDM2P Gene

Latest Assembly
chr1:182,441,577-182,442,451
(GRCh38/hg38)
Size:
875 bases
Orientation:
Plus strand

Previous Assembly
chr1:182,410,832-182,411,586
(GRCh37/hg19 by Entrez Gene)
Size:
755 bases
Orientation:
Plus strand

chr1:182,410,712-182,411,497
(GRCh37/hg19 by Ensembl)
Size:
786 bases
Orientation:
Plus strand

Genomic View for TEDDM2P Gene

Genes around TEDDM2P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TEDDM2P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TEDDM2P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TEDDM2P Gene

Proteins for TEDDM2P Gene

Post-translational modifications for TEDDM2P Gene

No Post-translational modifications

No data available for DME Specific Peptides for TEDDM2P Gene

Domains & Families for TEDDM2P Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for TEDDM2P Gene

Function for TEDDM2P Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TEDDM2P Gene

Localization for TEDDM2P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TEDDM2P Gene

Pathways & Interactions for TEDDM2P Gene

PathCards logo

SuperPathways for TEDDM2P Gene

No Data Available

Gene Ontology (GO) - Biological Process for TEDDM2P Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for TEDDM2P Gene

Drugs & Compounds for TEDDM2P Gene

No Compound Related Data Available

Transcripts for TEDDM2P Gene

mRNA/cDNA for TEDDM2P Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TEDDM2P Gene

No ASD Table

Relevant External Links for TEDDM2P Gene

GeneLoc Exon Structure for
TEDDM2P

Expression for TEDDM2P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for TEDDM2P Gene

genes like me logo Genes that share expression patterns with TEDDM2P: view

Primer products for research

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TEDDM2P Gene

Orthologs for TEDDM2P Gene

Evolution for TEDDM2P Gene

ENSEMBL:
Gene Tree for TEDDM2P (if available)
TreeFam:
Gene Tree for TEDDM2P (if available)

No data available for Orthologs for TEDDM2P Gene

Paralogs for TEDDM2P Gene

No data available for Paralogs for TEDDM2P Gene

Variants for TEDDM2P Gene

Additional Variant Information for TEDDM2P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TEDDM2P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TEDDM2P Gene

Disorders for TEDDM2P Gene

No disorders were found for TEDDM2P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TEDDM2P Gene

Publications for TEDDM2P Gene

No publications were found for TEDDM2P Gene.

No data available for Mastermind for TEDDM2P Gene

Products for TEDDM2P Gene

Sources for TEDDM2P Gene