Aliases for TDH-AS1 Gene

Data sources for TDH-AS1 Gene:

RNA type for TDH-AS1 Gene

lncRNA

Aliases for TDH-AS1 Gene

External Ids for TDH-AS1 Gene

Summaries for TDH-AS1 Gene

GeneCards Summary for TDH-AS1 Gene

TDH-AS1 (TDH Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for TDH-AS1 Gene

Genomics for TDH-AS1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for TDH-AS1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around TDH-AS1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for TDH-AS1 Gene

Latest Assembly
chr8:11,178,697-11,347,516
(GRCh38/hg38)
Size:
168,820 bases
Orientation:
Minus strand

Previous Assembly
chr8:11,203,257-11,205,025
(GRCh37/hg19 by Entrez Gene)
Size:
1,769 bases
Orientation:
Minus strand

chr8:11,203,257-11,205,011
(GRCh37/hg19 by Ensembl)
Size:
1,755 bases
Orientation:
Minus strand

Alternative Locations (GRCh38/hg38)

  • chr8(PATCHES):1,999,334-2,001,096 (+)

Genomic View for TDH-AS1 Gene

Genes around TDH-AS1 on UCSC Golden Path with GeneCards custom track
TDH-AS1 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
TDH-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TDH-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TDH-AS1 Gene

Proteins for TDH-AS1 Gene

Post-translational modifications for TDH-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TDH-AS1 Gene

Domains & Families for TDH-AS1 Gene

Gene Families for TDH-AS1 Gene

genes like me logo Genes that share domains with TDH-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for TDH-AS1 Gene

Function for TDH-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TDH-AS1 Gene

Localization for TDH-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TDH-AS1 Gene

Pathways & Interactions for TDH-AS1 Gene

PathCards logo

SuperPathways for TDH-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for TDH-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for TDH-AS1 Gene

Drugs & Compounds for TDH-AS1 Gene

No Compound Related Data Available

Transcripts for TDH-AS1 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for TDH-AS1 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS00005D4C7A_9606 lncRNA 1099 3

Ensembl: ENST00000525867 (view in UCSC) ,

LNCipedia: lnc-XKR6-3:1,

NONCODE: NONHSAT125050.2,

URS0000BC4648_9606 lncRNA 1113 1

RefSeq: NR_147705,

URS0000D57FBB_9606 lncRNA 19440 1

LNCipedia: lnc-XKR6-3:3,

URS0000D5B9E0_9606 lncRNA 18782 1

LNCipedia: lnc-XKR6-3:2,

URS0000D5B79C_9606 lncRNA 3734 1

LNCipedia: lnc-XKR6-3:4,

TDH-AS1 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for TDH-AS1 Gene

1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for TDH-AS1 Gene

No ASD Table

Relevant External Links for TDH-AS1 Gene

GeneLoc Exon Structure for
TDH-AS1

Expression for TDH-AS1 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for TDH-AS1

SOURCE GeneReport for Unigene cluster for TDH-AS1 Gene:

Hs.662094
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TDH-AS1 Gene

Orthologs for TDH-AS1 Gene

Evolution for TDH-AS1 Gene

ENSEMBL:
Gene Tree for TDH-AS1 (if available)
TreeFam:
Gene Tree for TDH-AS1 (if available)
Alliance of Genome Resources:
Additional Orthologs for TDH-AS1

No data available for Orthologs for TDH-AS1 Gene

Paralogs for TDH-AS1 Gene

No data available for Paralogs for TDH-AS1 Gene

Variants for TDH-AS1 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for TDH-AS1 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Additional Variant Information for TDH-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TDH-AS1
Leiden Open Variation Database (LOVD)
TDH-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TDH-AS1 Gene

Disorders for TDH-AS1 Gene

Additional Disease Information for TDH-AS1

Open Targets Platform
Open Targets Platform

No disorders were found for TDH-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TDH-AS1 Gene

Publications for TDH-AS1 Gene

No publications were found for TDH-AS1 Gene.

No data available for Mastermind for TDH-AS1 Gene

Products for TDH-AS1 Gene

Sources for TDH-AS1 Gene