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Aliases for TCF7L1-IT1 Gene

Subcategory (RNA class) for TCF7L1-IT1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for TCF7L1-IT1 Gene

  • TCF7L1 Intronic Transcript 1 2 3 5
  • TCF7L1 Intronic Transcript 1 (Non-Protein Coding) 2

External Ids for TCF7L1-IT1 Gene

Previous GeneCards Identifiers for TCF7L1-IT1 Gene

  • GC00U933050
  • GC02P085414

Summaries for TCF7L1-IT1 Gene

GeneCards Summary for TCF7L1-IT1 Gene

TCF7L1-IT1 (TCF7L1 Intronic Transcript 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for TCF7L1-IT1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TCF7L1-IT1 Gene

Genomics for TCF7L1-IT1 Gene

GeneHancer (GH) Regulatory Elements for TCF7L1-IT1 Gene

Promoters and enhancers for TCF7L1-IT1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I085132 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE dbSUPER 0.2 -52.3 -52276 3.4 SIN3A GLI4 ZNF2 ZBTB7B YY1 ETS1 ZNF121 GLIS2 ZNF143 KLF7 TCF7L1 POLR1A MAT2A GNLY TCF7L1-IT1
GH02I085189 Enhancer 0.5 ENCODE 0.8 +4.0 4003 2.1 CTCF GATA3 ZFP64 PRDM10 TCF7L1 TCF7L1-IT1 GC02P085205
GH02I085174 Enhancer 1 Ensembl ENCODE 0.4 -10.8 -10787 2.1 ELF3 SOX13 FOXA2 SAP130 MLX ARID4B MAX ZNF644 RAD21 YY1 TCF7L1 RNU6-674P TCF7L1-IT1
GH02I085178 Enhancer 0.7 ENCODE 0.4 -7.4 -7356 1.4 JUN FEZF1 ZIC2 ZNF664 ZNF316 ZSCAN5C MAFK SCRT1 MAFG OSR2 RNU6-674P TCF7L1 TCF7L1-IT1
GH02I085143 Enhancer 0.8 ENCODE 0.3 -42.4 -42409 1.4 FOXA2 ARID4B RAD21 RARA ETS1 YY1 CREM MIXL1 RXRA SP5 RNU6-674P TCF7L1 TCF7L1-IT1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around TCF7L1-IT1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TCF7L1-IT1 Gene

Genomic Locations for TCF7L1-IT1 Gene
chr2:85,186,409-85,187,253
(GRCh38/hg38)
Size:
845 bases
Orientation:
Plus strand
chr2:85,413,532-85,414,376
(GRCh37/hg19)

Genomic View for TCF7L1-IT1 Gene

Genes around TCF7L1-IT1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TCF7L1-IT1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TCF7L1-IT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for TCF7L1-IT1 Gene

Proteins for TCF7L1-IT1 Gene

Post-translational modifications for TCF7L1-IT1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TCF7L1-IT1 Gene

Domains & Families for TCF7L1-IT1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TCF7L1-IT1 Gene

Function for TCF7L1-IT1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TCF7L1-IT1 Gene

Localization for TCF7L1-IT1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TCF7L1-IT1 Gene

Pathways & Interactions for TCF7L1-IT1 Gene

SuperPathways for TCF7L1-IT1 Gene

No Data Available

Interacting Proteins for TCF7L1-IT1 Gene

Gene Ontology (GO) - Biological Process for TCF7L1-IT1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TCF7L1-IT1 Gene

Drugs & Compounds for TCF7L1-IT1 Gene

No Compound Related Data Available

Transcripts for TCF7L1-IT1 Gene

mRNA/cDNA for TCF7L1-IT1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TCF7L1-IT1 Gene

No ASD Table

Relevant External Links for TCF7L1-IT1 Gene

GeneLoc Exon Structure for
TCF7L1-IT1
ECgene alternative splicing isoforms for
TCF7L1-IT1

Expression for TCF7L1-IT1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TCF7L1-IT1 Gene

genes like me logo Genes that share expression patterns with TCF7L1-IT1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TCF7L1-IT1 Gene

Orthologs for TCF7L1-IT1 Gene

Evolution for TCF7L1-IT1 Gene

ENSEMBL:
Gene Tree for TCF7L1-IT1 (if available)
TreeFam:
Gene Tree for TCF7L1-IT1 (if available)

No data available for Orthologs for TCF7L1-IT1 Gene

Paralogs for TCF7L1-IT1 Gene

No data available for Paralogs for TCF7L1-IT1 Gene

Variants for TCF7L1-IT1 Gene

Additional Variant Information for TCF7L1-IT1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TCF7L1-IT1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TCF7L1-IT1 Gene

Disorders for TCF7L1-IT1 Gene

Additional Disease Information for TCF7L1-IT1

No disorders were found for TCF7L1-IT1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TCF7L1-IT1 Gene

Publications for TCF7L1-IT1 Gene

No publications were found for TCF7L1-IT1 Gene.

Products for TCF7L1-IT1 Gene

Sources for TCF7L1-IT1 Gene

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