Aliases for TBCAP2 Gene

Aliases for TBCAP2 Gene

  • Tubulin Folding Cofactor A Pseudogene 2 2 3 5
  • Tubulin-Specific Chaperone A Pseudogene 2 3
  • TBCAP2 5

External Ids for TBCAP2 Gene

Previous GeneCards Identifiers for TBCAP2 Gene

  • GC01U901135
  • GC01M014891
  • GC01M015019

Summaries for TBCAP2 Gene

GeneCards Summary for TBCAP2 Gene

TBCAP2 (Tubulin Folding Cofactor A Pseudogene 2) is a Pseudogene.

Additional gene information for TBCAP2 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for TBCAP2 Gene

Genomics for TBCAP2 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for TBCAP2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J014697 Enhancer 0.6 Ensembl 0.4 -6.8 -6777 3.2 NFE2 ZNF316 FOXA2 MAFF MAFG ZNF112 POLR2A MAFK BHLHE40 NRF1 TMEM51-AS1 ENSG00000237301 TBCAP2 lnc-CASP9-6 piR-39092 TMEM51 KAZN
GH01J014683 Enhancer 0.5 Ensembl 0.4 +9.3 9312 0.6 ZIC2 POLR2A ZNF561 OSR2 ZNF189 TRIM28 SP7 PKNOX1 ZEB2 TBCAP2 lnc-CASP9-6 HSALNG0001036 TMEM51 KAZN
GH01J014686 Enhancer 0.4 Ensembl 0.4 +5.5 5512 0.6 ATF7 CREB1 ATF2 JUND TBCAP2 lnc-CASP9-6 HSALNG0001036 TMEM51 KAZN
GH01J014668 Enhancer 0.6 Ensembl CraniofacialAtlas 0.4 +24.1 24112 1 KDM1A POLR2A RAD21 HSALNG0001036 TBCAP2 lnc-CASP9-6 TMEM51 KAZN
GH01J014660 Enhancer 0.5 ENCODE 0.3 +31.3 31316 1.4 ZBTB40 NFIC BCOR CREM ATF1 ATF2 ZMYM3 ATF7 CASP9 HSALNG0001036 TBCAP2 lnc-CASP9-6 TMEM51 KAZN
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around TBCAP2 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for TBCAP2 Gene

Genomic Locations for TBCAP2 Gene
chr1:14,691,937-14,692,613
(GRCh38/hg38)
Size:
677 bases
Orientation:
Minus strand
chr1:15,018,424-15,019,109
(GRCh37/hg19)
Size:
686 bases
Orientation:
Minus strand

Genomic View for TBCAP2 Gene

Genes around TBCAP2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TBCAP2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TBCAP2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TBCAP2 Gene

Proteins for TBCAP2 Gene

Post-translational modifications for TBCAP2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TBCAP2 Gene

Domains & Families for TBCAP2 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for TBCAP2 Gene

Function for TBCAP2 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TBCAP2 Gene

Localization for TBCAP2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TBCAP2 Gene

Pathways & Interactions for TBCAP2 Gene

PathCards logo

SuperPathways for TBCAP2 Gene

No Data Available

Gene Ontology (GO) - Biological Process for TBCAP2 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for TBCAP2 Gene

Drugs & Compounds for TBCAP2 Gene

No Compound Related Data Available

Transcripts for TBCAP2 Gene

mRNA/cDNA for TBCAP2 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TBCAP2 Gene

No ASD Table

Relevant External Links for TBCAP2 Gene

GeneLoc Exon Structure for
TBCAP2

Expression for TBCAP2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for TBCAP2 Gene

genes like me logo Genes that share expression patterns with TBCAP2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TBCAP2 Gene

Orthologs for TBCAP2 Gene

Evolution for TBCAP2 Gene

ENSEMBL:
Gene Tree for TBCAP2 (if available)
TreeFam:
Gene Tree for TBCAP2 (if available)

No data available for Orthologs for TBCAP2 Gene

Paralogs for TBCAP2 Gene

No data available for Paralogs for TBCAP2 Gene

Variants for TBCAP2 Gene

Additional Variant Information for TBCAP2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TBCAP2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TBCAP2 Gene

Disorders for TBCAP2 Gene

No disorders were found for TBCAP2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TBCAP2 Gene

Publications for TBCAP2 Gene

No publications were found for TBCAP2 Gene.

No data available for Mastermind for TBCAP2 Gene

Products for TBCAP2 Gene

Sources for TBCAP2 Gene