Aliases for TBC1D8-AS1 Gene

Subcategory (RNA class) for TBC1D8-AS1 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for TBC1D8-AS1 Gene

  • TBC1D8 Antisense RNA 1 2 3 5
  • TBC1D8-AS1 2 5 165
  • TBC1 Domain Family Member 8 Antisense RNA 1 2 3
  • NONHSAG028726.2 91
  • HSALNG0017347 164

External Ids for TBC1D8-AS1 Gene

Summaries for TBC1D8-AS1 Gene

GeneCards Summary for TBC1D8-AS1 Gene

TBC1D8-AS1 (TBC1D8 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for TBC1D8-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for TBC1D8-AS1 Gene

Genomics for TBC1D8-AS1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for TBC1D8-AS1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around TBC1D8-AS1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for TBC1D8-AS1 Gene

Genomic Locations for TBC1D8-AS1 Gene
chr2:101,151,586-101,156,137
(GRCh38/hg38)
Size:
4,552 bases
Orientation:
Plus strand
chr2:101,768,122-101,771,874
(GRCh37/hg19)
Size:
3,753 bases
Orientation:
Plus strand

Genomic View for TBC1D8-AS1 Gene

Genes around TBC1D8-AS1 on UCSC Golden Path with GeneCards custom track
TBC1D8-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
TBC1D8-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TBC1D8-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TBC1D8-AS1 Gene

Proteins for TBC1D8-AS1 Gene

Post-translational modifications for TBC1D8-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TBC1D8-AS1 Gene

Domains & Families for TBC1D8-AS1 Gene

Gene Families for TBC1D8-AS1 Gene

genes like me logo Genes that share domains with TBC1D8-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for TBC1D8-AS1 Gene

Function for TBC1D8-AS1 Gene

Phenotypes From GWAS Catalog for TBC1D8-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TBC1D8-AS1 Gene

Localization for TBC1D8-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TBC1D8-AS1 Gene

Pathways & Interactions for TBC1D8-AS1 Gene

PathCards logo

SuperPathways for TBC1D8-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for TBC1D8-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for TBC1D8-AS1 Gene

Drugs & Compounds for TBC1D8-AS1 Gene

No Compound Related Data Available

Transcripts for TBC1D8-AS1 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for TBC1D8-AS1 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000077636A_9606 lncRNA 2478 2

Ensembl: ENST00000610202 (view in UCSC) ,

LNCipedia: TBC1D8-AS1:10,

URS0000A7724B_9606 lncRNA 2478 2

HGNC: 52782,

RefSeq: NR_135594,

URS0000358847_9606 lncRNA 2476 2

LNCipedia: TBC1D8-AS1:9,

NONCODE: NONHSAT072811.2,

URS00009B8286_9606 lncRNA 2476 2

LncBook: HSALNT0036533,

NONCODE: NONHSAT182267.1,

URS0000D572DC_9606 lncRNA 4506 1

LNCipedia: TBC1D8-AS1:8,

TBC1D8-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for TBC1D8-AS1 Gene

4 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for TBC1D8-AS1 Gene

No ASD Table

Relevant External Links for TBC1D8-AS1 Gene

GeneLoc Exon Structure for
TBC1D8-AS1

Expression for TBC1D8-AS1 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for TBC1D8-AS1

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TBC1D8-AS1 Gene

Orthologs for TBC1D8-AS1 Gene

Evolution for TBC1D8-AS1 Gene

ENSEMBL:
Gene Tree for TBC1D8-AS1 (if available)
TreeFam:
Gene Tree for TBC1D8-AS1 (if available)

No data available for Orthologs for TBC1D8-AS1 Gene

Paralogs for TBC1D8-AS1 Gene

No data available for Paralogs for TBC1D8-AS1 Gene

Variants for TBC1D8-AS1 Gene

Additional dbSNP identifiers (rs#s) for TBC1D8-AS1 Gene

Additional Variant Information for TBC1D8-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TBC1D8-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TBC1D8-AS1 Gene

Disorders for TBC1D8-AS1 Gene

Additional Disease Information for TBC1D8-AS1

No disorders were found for TBC1D8-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TBC1D8-AS1 Gene

Publications for TBC1D8-AS1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3

No data available for Mastermind for TBC1D8-AS1 Gene

Products for TBC1D8-AS1 Gene

Sources for TBC1D8-AS1 Gene