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Aliases for SUSD1 Gene
Aliases for SUSD1 Gene
External Ids for SUSD1 Gene
- HGNC: 25413
- NCBI Entrez Gene: 64420
- Ensembl: ENSG00000106868
- UniProtKB/Swiss-Prot: Q6UWL2
Previous GeneCards Identifiers for SUSD1 Gene
- GC09M110182
- GC09M111882
- GC09M113842
- GC09M114803
- GC09M084401
Summaries for SUSD1 Gene
GeneCards Summary for SUSD1 Gene
SUSD1 (Sushi Domain Containing 1) is a Protein Coding gene. Diseases associated with SUSD1 include Seckel Syndrome 1 and Carpenter Syndrome 1. Gene Ontology (GO) annotations related to this gene include calcium ion binding.
Additional gene information for SUSD1 Gene
- HGNC (25413)
- NCBI Entrez Gene (64420)
- Ensembl (ENSG00000106868)
- UniProtKB/Swiss-Prot (Q6UWL2)
- Open Targets Platform(ENSG00000106868)
- Monarch Initiative
- Search for SUSD1 at DataMed
- Search for SUSD1 at HumanCyc
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for SUSD1 Gene
Genomics for SUSD1 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for SUSD1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around SUSD1 on the GeneHancer Hub at the UCSC Golden Path
Cistromic (ChIP-Seq) regulation report from SPP (The Signaling Pathways Project) for SUSD1
- Top Transcription factor binding sites by QIAGEN in the SUSD1 gene promoter:
-
- AhR
- AML1a
- Arnt
- c-Myb
- GATA-1
- HNF-3beta
- LUN-1
- POU2F1
- POU2F1a
- Zic1
Genomic Locations for SUSD1 Gene
Latest Assembly
- chr9:112,040,783-112,175,515
- (GRCh38/hg38)
- Size:
- 134,733 bases
- Orientation:
- Minus strand
Previous Assembly
- chr9:114,803,063-114,937,577
- (GRCh37/hg19 by Entrez Gene)
- Size:
- 134,515 bases
- Orientation:
- Minus strand
- chr9:114,803,065-114,937,688
- (GRCh37/hg19 by Ensembl)
- Size:
- 134,624 bases
- Orientation:
- Minus strand
Genomic View for SUSD1 Gene
Genes around SUSD1 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 9q31.3-q32 by HGNC
- 9q31.3-q32 by Entrez Gene
- 9q32 by Ensembl
SUSD1 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for SUSD1 Gene
Proteins for SUSD1 Gene
-
Protein details for SUSD1 Gene (UniProtKB/Swiss-Prot)
- Protein Symbol:
- Q6UWL2-SUSD1_HUMAN
- Recommended name:
- Sushi domain-containing protein 1
- Protein Accession:
- Q6UWL2
- A1A4C5
- A8KA03
- Q5T8V6
- Q5T8V7
- Q6P9G7
- Q8WU83
- Q96DM9
- Q9H6V2
- Q9NTA7
Protein attributes for SUSD1 Gene
- Size:
- 747 amino acids
- Molecular mass:
- 82710 Da
- Quaternary structure:
- No Data Available
- SequenceCaution:
-
- Sequence=BAB15149.1; Type=Erroneous initiation; Note=Truncated N-terminus.; Evidence={ECO:0000305}; Sequence=BAB71259.1; Type=Erroneous initiation; Note=Truncated N-terminus.; Evidence={ECO:0000305};
Protein Expression for SUSD1 Gene
Post-translational modifications for SUSD1 Gene
Other Protein References for SUSD1 Gene
- ENSEMBL proteins:
- REFSEQ proteins:
Antibodies for research
- LifeSpan BioSciences SUSD1 Antibody
-
Custom Antibody ServicesOriGene Antibodies for SUSD1
- Novus Biologicals Antibodies for SUSD1
- Invitrogen Antibodies for SUSD1 (AFLGC-SUSD1)
- antibodies-online: Show 3 available SUSD1 Antibodies ranked by validation data
-
Boster Bio Antibodies for SUSD1
-
Custom Antibody ServicesProSci Antibodies for SUSD1
Protein products for research
-
OriGene Purified Proteins for SUSD1
- Search Origene for MassSpec and Protein Over-expression Lysates for SUSD1
- Origene Custom Protein Services for SUSD1
- Novus Biologicals proteins for SUSD1
Assay products for research
No data available for DME Specific Peptides for SUSD1 Gene
Domains & Families for SUSD1 Gene
Gene Families for SUSD1 Gene
- HGNC:
- Human Protein Atlas (HPA):
-
- Predicted intracellular proteins
- Predicted membrane proteins
Protein Domains for SUSD1 Gene
Suggested Antigen Peptide Sequences for SUSD1 Gene
- GenScript: Design optimal peptide antigens:
-
- Sushi domain containing 1 (Q4VXJ3_HUMAN)
- Sushi domain-containing protein 1 (SUSD1_HUMAN)
No data available for Graphical View of Domain Structure and UniProtKB/Swiss-Prot for SUSD1 Gene
Function for SUSD1 Gene
Phenotypes From GWAS Catalog for SUSD1 Gene
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0005509 | calcium ion binding | IEA | -- |
Phenotypes for SUSD1 Gene
- MGI mutant phenotypes for SUSD1:
- inferred from 1 alleles
- GenomeRNAi human phenotypes for SUSD1:
Animal Models for research
-
Taconic Biosciences Mouse Models for SUSD1
CRISPR products for research
- Applied Biological Materials (abm): CRISPR Clones for SUSD1 - Starting at $85 >
- * SUSD1 CRISPR as ready-to-use vector or virus: Non-viral | Lenti- | Adeno- | AAV- | siRNA - Browse All
- * Cas9 Nucleases, Nickases, Null Mutants, and GFP tag also available.
-
OriGene CRISPR knockouts for SUSD1
- Search GeneCopoeia for CRISPR/Cas9 clones, lentivirus and AAV products for SUSD1
-
Santa Cruz Biotechnology (SCBT) CRISPR for SUSD1
miRNA for SUSD1 Gene
- miRTarBase miRNAs that target SUSD1
-
- hsa-miR-1-3p (MIRT023738)
- hsa-miR-6513-5p (MIRT569214)
- hsa-miR-887-5p (MIRT569215)
- hsa-miR-3913-5p (MIRT569216)
- hsa-miR-3122 (MIRT569217)
- hsa-miR-450a-1-3p (MIRT569218)
- hsa-miR-6779-5p (MIRT569219)
- hsa-miR-6780a-5p (MIRT569220)
- hsa-miR-3689c (MIRT569221)
- hsa-miR-3689b-3p (MIRT569222)
- hsa-miR-3689a-3p (MIRT569223)
- hsa-miR-1273h-5p (MIRT569224)
- hsa-miR-30b-3p (MIRT569225)
- hsa-miR-6788-5p (MIRT569226)
- hsa-miR-30c-2-3p (MIRT569227)
- hsa-miR-30c-1-3p (MIRT569228)
- hsa-miR-6799-5p (MIRT569229)
- hsa-miR-6883-5p (MIRT569230)
- hsa-miR-6785-5p (MIRT569231)
- hsa-miR-4728-5p (MIRT569232)
- hsa-miR-149-3p (MIRT569233)
- hsa-miR-7106-5p (MIRT569234)
- hsa-miR-25-5p (MIRT569235)
- hsa-miR-6894-5p (MIRT569236)
- hsa-miR-139-3p (MIRT569237)
- hsa-miR-5091 (MIRT569238)
- hsa-miR-6087 (MIRT569239)
- hsa-miR-6767-3p (MIRT569240)
- hsa-miR-483-5p (MIRT569241)
- hsa-miR-3187-3p (MIRT692627)
- hsa-miR-4435 (MIRT692628)
- hsa-miR-588 (MIRT692629)
- hsa-miR-4701-5p (MIRT692630)
- hsa-miR-548s (MIRT692631)
- hsa-miR-6131 (MIRT692632)
- hsa-miR-4755-3p (MIRT692633)
- hsa-miR-4635 (MIRT692634)
- hsa-miR-3663-5p (MIRT692635)
- hsa-miR-4716-5p (MIRT692636)
- hsa-miR-4717-3p (MIRT692637)
- hsa-miR-4781-3p (MIRT692638)
- hsa-miR-942-3p (MIRT692639)
- hsa-miR-4643 (MIRT692640)
- hsa-miR-6873-3p (MIRT722086)
- hsa-miR-5699-3p (MIRT722087)
- hsa-miR-511-5p (MIRT722088)
- hsa-miR-6888-3p (MIRT722089)
- hsa-miR-6868-3p (MIRT722090)
- hsa-miR-2355-5p (MIRT722091)
- hsa-miR-6830-3p (MIRT722092)
- hsa-miR-3124-3p (MIRT722093)
- hsa-miR-3120-5p (MIRT722094)
- hsa-miR-6877-3p (MIRT722095)
- hsa-miR-6819-3p (MIRT722096)
- hsa-miR-7109-3p (MIRT722097)
- hsa-miR-1193 (MIRT735926)
- hsa-miR-1294 (MIRT737183)
- hsa-miR-370-5p (MIRT742552)
- hsa-miR-1470 (MIRT762739)
- hsa-miR-1827 (MIRT763126)
- hsa-miR-1910-3p (MIRT763349)
- hsa-miR-2467-3p (MIRT764141)
- hsa-miR-3160-3p (MIRT765150)
- hsa-miR-34b-3p (MIRT765805)
- hsa-miR-3612 (MIRT765955)
- hsa-miR-3614-5p (MIRT766068)
- hsa-miR-377-5p (MIRT767483)
- hsa-miR-4257 (MIRT768177)
- hsa-miR-4487 (MIRT769687)
- hsa-miR-4649-3p (MIRT770677)
- hsa-miR-4667-3p (MIRT770836)
- hsa-miR-4722-5p (MIRT771591)
- hsa-miR-4768-3p (MIRT772139)
- hsa-miR-558 (MIRT774858)
- hsa-miR-6086 (MIRT775613)
- hsa-miR-642a-5p (MIRT776166)
- hsa-miR-6500-3p (MIRT776474)
- hsa-miR-650 (MIRT776713)
- hsa-miR-6511a-5p (MIRT776848)
- hsa-miR-665 (MIRT777627)
- hsa-miR-6788-3p (MIRT779223)
- hsa-miR-6808-5p (MIRT779719)
- hsa-miR-6893-5p (MIRT781251)
- hsa-miR-7160-5p (MIRT781644)
- hsa-miR-766-3p (MIRT781909)
- hsa-miR-940 (MIRT782944)
miRNA products for research
Inhibitory RNAs for research
- Origene shrna, sirna, and RNAi products in human, mouse, rat for SUSD1
- Browse OriGene Inhibitory RNA Products For SUSD1
- Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for SUSD1
Clone products for research
- Applied Biological Materials (abm): Clones for SUSD1 - Starting at $45 >
- * SUSD1 as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Retro- | Protein Vector - Browse All
- * Viral Packaging Services and High Titer Production Services also available.
- Sino Biological Human cDNA Clone for SUSD1
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles and/or promoter clone products for SUSD1
Cell Lines for research
-
Horizon Cell Lines for SUSD1
No data available for Molecular function , Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for SUSD1 Gene
Localization for SUSD1 Gene
Subcellular locations from UniProtKB/Swiss-Prot for SUSD1 Gene
- Membrane. Single-pass type I membrane protein.
| Compartment | Confidence |
|---|---|
| plasma membrane | 3 |
| cytoskeleton | 2 |
| nucleus | 2 |
| extracellular | 1 |
| peroxisome | 1 |
| mitochondrion | 0 |
| endoplasmic reticulum | 0 |
| golgi apparatus | 0 |
- Nucleoplasm (2)
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0016020 | membrane | IEA | -- |
| GO:0016021 | integral component of membrane | IEA | -- |
Pathways & Interactions for SUSD1 Gene
Interacting Proteins for SUSD1 Gene
Selected Interacting proteins:
Q6UWL2-SUSD1_HUMAN
ENSP00000363382
for SUSD1 Gene via
MINT
STRING
IID
GPS-Prot Interaction Network for SUSD1
No data available for Pathways by source and SIGNOR curated interactions for SUSD1 Gene
Transcripts for SUSD1 Gene
mRNA/cDNA for SUSD1 Gene
- 3 REFSEQ mRNAs :
- 11 NCBI additional mRNA sequence :
- 10 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000355396 2861 nts (view in UCSC)
- ENST00000374263 2973 nts (view in UCSC)
- ENST00000374264 2754 nts (view in UCSC)
- ENST00000374270 3015 nts (view in UCSC)
- ENST00000415074 842 nts (view in UCSC)
CRISPR products for research
- Applied Biological Materials (abm): CRISPR Clones for SUSD1 - Starting at $85 >
- * SUSD1 CRISPR as ready-to-use vector or virus: Non-viral | Lenti- | Adeno- | AAV- | siRNA - Browse All
- * Cas9 Nucleases, Nickases, Null Mutants, and GFP tag also available.
-
OriGene CRISPR knockouts for SUSD1
- Search GeneCopoeia for CRISPR/Cas9 clones, lentivirus and AAV products for SUSD1
-
Santa Cruz Biotechnology (SCBT) CRISPR for SUSD1
miRNA products for research
Inhibitory RNAs for research
- Origene shrna, sirna, and RNAi products in human, mouse, rat for SUSD1
- Browse OriGene Inhibitory RNA Products For SUSD1
- Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for SUSD1
Clone products for research
- Applied Biological Materials (abm): Clones for SUSD1 - Starting at $45 >
- * SUSD1 as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Retro- | Protein Vector - Browse All
- * Viral Packaging Services and High Titer Production Services also available.
- Sino Biological Human cDNA Clone for SUSD1
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles and/or promoter clone products for SUSD1
| ExUns: | 1a | · | 1b | ^ | 2 | ^ | 3 | ^ | 4 | ^ | 5 | ^ | 6a | · | 6b | ^ | 7 | ^ | 8 | ^ | 9a | · | 9b | ^ | 10 | ^ | 11 | ^ | 12 | ^ | 13 | ^ | 14 | ^ | 15 | ^ | 16 | ^ | 17 | ^ | 18 | ^ | 19 | ^ | 20 | ^ | 21a | · | 21b |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SP1: | - | - | - | - | |||||||||||||||||||||||||||||||||||||||||||||
| SP2: | - | - | - | - | - | ||||||||||||||||||||||||||||||||||||||||||||
| SP3: | - | - | - | - | - | - | |||||||||||||||||||||||||||||||||||||||||||
| SP4: | - | - | |||||||||||||||||||||||||||||||||||||||||||||||
| SP5: | - | ||||||||||||||||||||||||||||||||||||||||||||||||
| SP6: | |||||||||||||||||||||||||||||||||||||||||||||||||
| SP7: | - | - |
Relevant External Links for SUSD1 Gene
- GeneLoc Exon Structure for
- SUSD1
Expression for SUSD1 Gene
mRNA differential expression in normal tissues according to GTEx for SUSD1 Gene
This gene is overexpressed in Whole Blood (x5.6).
This gene is overexpressed in Peripheral blood mononuclear cells (48.1) and Platelet (20.9).
Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for SUSD1 Gene
Transcriptomic regulation report from SPP (The Signaling Pathways Project) for SUSD1
SOURCE GeneReport for Unigene cluster for SUSD1 Gene:
Hs.494827Evidence on tissue expression from TISSUES for SUSD1 Gene
- Blood(4.3)
- Nervous system(4.3)
Primer products for research
-
OriGene qPCR primer pairs for SUSD1
-
OriGene qPCR primer pairs and template standards for SUSD1
Gene Expression Assays for research
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA Expression by UniProt/SwissProt and Phenotype-based relationships between genes and organs from Gene ORGANizer for SUSD1 Gene
Orthologs for SUSD1 Gene
This gene was present in the common ancestor of chordates.
| Organism | Taxonomy | Gene | Similarity | Type | Details |
|---|---|---|---|---|---|
| Chimpanzee (Pan troglodytes) |
Mammalia | SUSD1 30 31 |
|
OneToOne | |
| Cow (Bos Taurus) |
Mammalia | SUSD1 30 31 |
|
OneToOne | |
| Dog (Canis familiaris) |
Mammalia | SUSD1 30 31 |
|
OneToOne | |
| Mouse (Mus musculus) |
Mammalia | Susd1 30 17 31 |
|
OneToOne | |
| Rat (Rattus norvegicus) |
Mammalia | Susd1 30 |
|
||
| Platypus (Ornithorhynchus anatinus) |
Mammalia | -- 31 |
|
OneToMany | |
| -- 31 |
|
OneToMany | |||
| -- 31 |
|
OneToMany | |||
| Oppossum (Monodelphis domestica) |
Mammalia | SUSD1 31 |
|
OneToOne | |
| Chicken (Gallus gallus) |
Aves | SUSD1 30 31 |
|
OneToOne | |
| Lizard (Anolis carolinensis) |
Reptilia | SUSD1 31 |
|
OneToOne | |
| Tropical Clawed Frog (Silurana tropicalis) |
Amphibia | susd1 30 |
|
||
| MGC75573 30 |
|
||||
| Zebrafish (Danio rerio) |
Actinopterygii | SUSD1 (2 of 3) 31 |
|
OneToMany | |
| SUSD1 (1 of 3) 31 |
|
OneToMany | |||
| SUSD1 (3 of 3) 31 |
|
OneToMany |
- Species where no ortholog for SUSD1 was found in the sources mined by GeneCards:
-
- A. gosspyii yeast (Eremothecium gossypii)
- Actinobacteria (Mycobacterium tuberculosis)
- African clawed frog (Xenopus laevis)
- African malaria mosquito (Anopheles gambiae)
- Alicante grape (Vitis vinifera)
- Alpha proteobacteria (Wolbachia pipientis)
- Amoeba (Dictyostelium discoideum)
- Archea (Pyrococcus horikoshii)
- Baker's yeast (Saccharomyces cerevisiae)
- Barley (Hordeum vulgare)
- Beta proteobacteria (Neisseria meningitidis)
- Bread mold (Neurospora crassa)
- Chromalveolata (Phytophthora infestans)
- Common water flea (Daphnia pulex)
- Corn (Zea mays)
- E. coli (Escherichia coli)
- Filamentous fungi (Aspergillus nidulans)
- Firmicute Bacteria (Streptococcus pneumoniae)
- Fission Yeast (Schizosaccharomyces pombe)
- Fruit Fly (Drosophila melanogaster)
- Green Algae (Chlamydomonas reinhardtii)
- Honey Bee (Apis mellifera)
- K. Lactis Yeast (Kluyveromyces lactis)
- Loblloly Pine (Pinus taeda)
- Malaria Parasite (Plasmodium falciparum)
- Medicago Trunc (Medicago Truncatula)
- Moss (Physcomitrella patens)
- Orangutan (Pongo pygmaeus)
- Pig (Sus scrofa)
- Rainbow Trout (Oncorhynchus mykiss)
- Rice (Oryza sativa)
- Rice Blast Fungus (Magnaporthe grisea)
- Schistosome Parasite (Schistosoma mansoni)
- Sea Anemone (Nematostella vectensis)
- Sea Vase (Ciona intestinalis)
- Sea Squirt (Ciona savignyi)
- Sea Urchin (Strongylocentrotus purpuratus)
- Sorghum (Sorghum bicolor)
- Soybean (Glycine max)
- Stem Rust Fungus (Puccinia graminis)
- Sugarcane (Saccharum officinarum)
- Thale Cress (Arabidopsis thaliana)
- Tomato (Lycopersicon esculentum)
- Toxoplasmosis (Toxoplasma gondii)
- Trichoplax (Trichoplax adhaerens)
- Wheat (Triticum aestivum)
- Worm (Caenorhabditis elegans)
Evolution for SUSD1 Gene
- ENSEMBL:
- Gene Tree for SUSD1 (if available)
- TreeFam:
- Gene Tree for SUSD1 (if available)
- Aminode:
- Evolutionary constrained regions (ECRs) for SUSD1: view image
Paralogs for SUSD1 Gene
(2) SIMAP similar genes for SUSD1 Gene using alignment to 5 proteins:
- SUSD1_HUMAN
- F8WAQ1_HUMAN
- H0Y6B2_HUMAN
- H0YCH6_HUMAN
- H3BLV4_HUMAN
No data available for Paralogs for SUSD1 Gene
Variants for SUSD1 Gene
Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP for SUSD1 Gene
| SNP ID | Clinical significance and condition | Chr 09 pos | Variation | AA Info | Type |
|---|---|---|---|---|---|
| rs115339119 | Benign: not provided | 112,157,606(-) |
G/A NM_022486.5(SUSD1):c.111C>T (p.Asp37=) |
SYNONYMOUS | |
| rs143390223 | Benign: not provided | 112,143,473(-) |
G/A NM_022486.5(SUSD1):c.524C>T (p.Thr175Ile) |
MISSENSE | |
| rs146611081 | Benign: not provided | 112,111,717(-) |
C/T NM_022486.5(SUSD1):c.1108G>A (p.Val370Met) |
MISSENSE | |
| rs146843448 | Likely Benign: not provided | 112,041,911(-) |
C/T NM_022486.5(SUSD1):c.2199G>A (p.Leu733=) |
NONSENSE,SYNONYMOUS | |
| rs147151457 | Likely Benign: not provided | 112,078,557(-) |
G/A NM_022486.5(SUSD1):c.1734C>T (p.Ser578=) |
SYNONYMOUS |
All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).
| Variant ID | Type | Subtype | PubMed ID |
|---|---|---|---|
| dgv4126n106 | CNV | deletion | 24896259 |
| dgv494e215 | CNV | deletion | 23714750 |
| esv1083675 | CNV | insertion | 17803354 |
| esv2180224 | CNV | deletion | 18987734 |
| esv2552622 | CNV | deletion | 19546169 |
| esv2555427 | CNV | insertion | 19546169 |
| esv2675703 | CNV | deletion | 23128226 |
| esv2738945 | CNV | deletion | 23290073 |
| esv2762828 | CNV | gain | 21179565 |
| nsv1077175 | CNV | deletion | 25765185 |
| nsv1137498 | CNV | deletion | 24896259 |
| nsv415911 | CNV | deletion | 16902084 |
| nsv615195 | CNV | loss | 21841781 |
| nsv972800 | CNV | duplication | 23825009 |
Residual Variation Intolerance Score:
39.9% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score:
2.55;
44.36% of all genes are more intolerant (likely to be disease-causing)
Additional Variant Information for SUSD1 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- SUSD1
SNP Genotyping and Copy Number Assays for research
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for SUSD1 Gene
Disorders for SUSD1 Gene
| Disorder | Aliases | PubMed IDs |
|---|---|---|
| seckel syndrome 1 |
|
|
| carpenter syndrome 1 |
|
|
Search SUSD1 in MalaCards
View complete list of genes associated with diseases
Additional Disease Information for SUSD1
- Genetic Association Database
- (GAD)
- Human Genome Epidemiology Navigator
- (HuGE)
- Atlas
- ATLAS of Genetics and Cytogenetics in Oncology and Haematology
- Open Targets Platform
- Open Targets Platform
No data available for UniProtKB/Swiss-Prot and Genatlas for SUSD1 Gene
Publications for SUSD1 Gene
- The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment. (PMID: 12975309) Clark HF … Gray A (Genome research 2003) 2 3 4
- Follow-up association studies of chromosome region 9q and nonsyndromic cleft lip/palate. (PMID: 20583170) Letra A … Vieira AR (American journal of medical genetics. Part A 2010) 3 41
- Genome-wide genotyping in amyotrophic lateral sclerosis and neurologically normal controls: first stage analysis and public release of data. (PMID: 17362836) Schymick JC … Traynor BJ (The Lancet. Neurology 2007) 3 41
- Elucidation of N-glycosylation sites on human platelet proteins: a glycoproteomic approach. (PMID: 16263699) Lewandrowski U … Sickmann A (Molecular & cellular proteomics : MCP 2006) 3 4
- DNA sequence and analysis of human chromosome 9. (PMID: 15164053) Humphray SJ … Dunham I (Nature 2004) 3 4
ExternalLinks
Products for SUSD1 Gene
- Custom Antibody ServicesOriGene Antibodies for SUSD1
- Browse OriGene ELISA Kits
- Custom Assay Services
- OriGene Purified Proteins for SUSD1
- Search Origene for MassSpec and Protein Over-expression Lysates for SUSD1
- Origene Custom Protein Services for SUSD1
- Origene shrna, sirna, and RNAi products in human, mouse, rat for SUSD1
- Browse OriGene Inhibitory RNA Products For SUSD1
- OriGene qPCR primer pairs for SUSD1
- OriGene qPCR primer pairs and template standards for SUSD1
- OriGene CRISPR knockouts for SUSD1
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For SUSD1
- Sino Biological Human cDNA Clone for SUSD1
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
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- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Novus Biologicals Antibodies for SUSD1
- Novus Biologicals proteins for SUSD1
- Browse Antibodies
- Browse Peptides and Proteins
- Browse Lysates
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- Taconic Biosciences Mouse Models for SUSD1
- Find your next knockout model in the Taconic Knockout Repository
- Genetically Engineered Models Available Immediately
- Humanized Mice
- Invitrogen Antibodies for SUSD1 (AFLGC-SUSD1)
- VectorBuilder Custom and pre-made DNA vectors for SUSD1 (ie. gene expression, shRNA knockdown, CRISPR)
- VectorBuilder Viral vectors for SUSD1 (ie. lentivirus, AAV, adenovirus)
- VectorBuilder CRISPR vectors for SUSD1 (ie. knockout, knockin, CRISPRa, CRISPRi)
- VectorBuilder Virus packaging for SUSD1 CRISPR vectors (ie. lentivirus, AAV, adenovirus)
- VectorBuilder Stable cell line generation for SUSD1
- antibodies-online: Show 3 available SUSD1 Antibodies ranked by validation data
- antibodies-online: Search results for available SUSD1 related products ranked by validation data
- antibodies-online: Search results for available SUSD1 related products ranked by validation data
- Custom Antibody ServicesProSci Antibodies for SUSD1
- Search for SUSD1 Proteins at ProSci
- Horizon Cell Lines for SUSD1
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for CRISPR/Cas9 clones, lentivirus and AAV products for SUSD1
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles and/or promoter clone products for SUSD1
- Search GeneCopoeia for miRNA 3'UTR Target clone products for SUSD1
- Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for SUSD1
- Boster Bio Antibodies for SUSD1
- Browse Boster Bio ELISA Kits
Sources for SUSD1 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM® (Updated: 05-Mar-2021)
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) MedlinePlus Genetics
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNAcentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Open Targets Platform
- (175) 5SRRNADB
- (176) snoDB
- (177) MirGeneDB