SUMO1P4 Gene (Pseudogene)

SUMO1 Pseudogene 4

GC19P049275
GIFtS:
5
See more...

Aliases for SUMO1P4 Gene

Aliases for SUMO1P4 Gene

  • SUMO1 Pseudogene 4 2 3 5
  • SUMO1P4 5

External Ids for SUMO1P4 Gene

Previous GeneCards Identifiers for SUMO1P4 Gene

  • GC19M054471
  • GC19M049779
  • GC19P049780

Summaries for SUMO1P4 Gene

GeneCards Summary for SUMO1P4 Gene

SUMO1P4 (SUMO1 Pseudogene 4) is a Pseudogene.

Additional gene information for SUMO1P4 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for SUMO1P4 Gene

Genomics for SUMO1P4 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for SUMO1P4 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH19J049271 Enhancer 0.8 Ensembl ENCODE 0.7 -3.0 -2959 2 ZIC2 ARNT ZBTB44 JUND CTBP1 ZEB1 OSR2 FOS PKNOX1 ZNF217 DKKL1 ENSG00000268686 KASH5 TRPM4 SUMO1P4 SLC6A21P SLC6A16
GH19J049270 Enhancer 0.3 Ensembl 0.7 -4.3 -4325 0.2 ZNF121 ENSG00000268686 SUMO1P4 SLC6A21P SLC6A16 TRPM4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around SUMO1P4 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for SUMO1P4 Gene

Genomic Locations for SUMO1P4 Gene
chr19:49,275,026-49,276,499
(GRCh38/hg38)
Size:
1,474 bases
Orientation:
Plus strand
chr19:49,778,376-49,778,677
(GRCh37/hg19)
Size:
302 bases
Orientation:
Plus strand

Genomic View for SUMO1P4 Gene

Genes around SUMO1P4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SUMO1P4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SUMO1P4 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for SUMO1P4 Gene

Proteins for SUMO1P4 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for SUMO1P4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SUMO1P4 Gene

Domains & Families for SUMO1P4 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for SUMO1P4 Gene

Function for SUMO1P4 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SUMO1P4 Gene

Localization for SUMO1P4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SUMO1P4 Gene

Pathways & Interactions for SUMO1P4 Gene

PathCards logo

SuperPathways for SUMO1P4 Gene

No Data Available

Gene Ontology (GO) - Biological Process for SUMO1P4 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for SUMO1P4 Gene

Drugs & Compounds for SUMO1P4 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for SUMO1P4 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for SUMO1P4 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for SUMO1P4 Gene

No ASD Table

Relevant External Links for SUMO1P4 Gene

GeneLoc Exon Structure for
SUMO1P4

Expression for SUMO1P4 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for SUMO1P4 Gene

mRNA expression in normal human tissues for SUMO1P4 Gene
mRNA expression by GTEx for SUMO1P4 Gene
genes like me logo Genes that share expression patterns with SUMO1P4: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SUMO1P4 Gene

Orthologs for SUMO1P4 Gene

Evolution for SUMO1P4 Gene

ENSEMBL:
Gene Tree for SUMO1P4 (if available)
TreeFam:
Gene Tree for SUMO1P4 (if available)

No data available for Orthologs for SUMO1P4 Gene

Paralogs for SUMO1P4 Gene

No data available for Paralogs for SUMO1P4 Gene

Variants for SUMO1P4 Gene

Additional Variant Information for SUMO1P4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SUMO1P4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SUMO1P4 Gene

Disorders for SUMO1P4 Gene

No disorders were found for SUMO1P4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SUMO1P4 Gene

Publications for SUMO1P4 Gene

  1. Molecular features of human ubiquitin-like SUMO genes and their encoded proteins. (PMID: 12383504) Su HL … Li SS (Gene 2002) 2 3
  2. The ubiquitin-homology gene PIC1: characterization of mouse (Pic1) and human (UBL1) genes and pseudogenes. (PMID: 9465300) Howe K … Solomon E (Genomics 1998) 2 3

No data available for Mastermind for SUMO1P4 Gene

Products for SUMO1P4 Gene

Sources for SUMO1P4 Gene