Free for academic non-profit institutions. Other users need a Commercial license

Aliases for SUCLA2-AS1 Gene

Subcategory (RNA class) for SUCLA2-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for SUCLA2-AS1 Gene

  • SUCLA2 Antisense RNA 1 2 3 5
  • SUCLA2 Antisense RNA 1 (Non-Protein Coding) 2 3

External Ids for SUCLA2-AS1 Gene

Previous GeneCards Identifiers for SUCLA2-AS1 Gene

  • GC00U932976
  • GC13P048576

Summaries for SUCLA2-AS1 Gene

GeneCards Summary for SUCLA2-AS1 Gene

SUCLA2-AS1 (SUCLA2 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for SUCLA2-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SUCLA2-AS1 Gene

Genomics for SUCLA2-AS1 Gene

GeneHancer (GH) Regulatory Elements for SUCLA2-AS1 Gene

Promoters and enhancers for SUCLA2-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH13J047999 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 609.9 -0.2 -225 3.9 SP1 ZNF652 ZFX ELF3 NKRF POLR2A MLLT1 ZNF384 ZNF24 ZBTB7A SUCLA2 SUCLA2-AS1 MED4 MED4-AS1 LINC00562
GH13J048036 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 10.1 +37.1 37091 4.5 ZNF652 SP1 CC2D1A CTCF ELF3 NKRF POLR2A ZNF121 CEBPG GTF2F1 SUCLA2 NUDT15 PPP1R26P1 MED4 SUCLA2-AS1 ENSG00000276968
GH13J048241 Enhancer 1 Ensembl ENCODE dbSUPER 4.6 +245.9 245912 11.8 PKNOX1 SOX13 ZNF10 OSR2 ZNF513 FEZF1 ZNF843 PRDM6 BCL6B RB1 RB1-DT MED4 MED4-AS1 LINC00462 SUCLA2-AS1 ITM2B
GH13J048004 Enhancer 0.4 Ensembl ENCODE 9.9 +3.1 3112 2.2 SUCLA2 MED4 SUCLA2-AS1 PIR59035 GC13P048032 GC13P048033
GH13J047959 Enhancer 0.5 Ensembl 7.4 -41.7 -41688 0.2 ZNF143 ZBTB7B CEBPZ ZNF280D MED4 SUCLA2 SUCLA2-AS1 LINC00562
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around SUCLA2-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for SUCLA2-AS1 Gene

Genomic Locations for SUCLA2-AS1 Gene
chr13:48,001,389-48,002,614
(GRCh38/hg38)
Size:
1,226 bases
Orientation:
Plus strand
chr13:48,575,525-48,576,688
(GRCh37/hg19)
Size:
1,164 bases
Orientation:
Plus strand

Genomic View for SUCLA2-AS1 Gene

Genes around SUCLA2-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SUCLA2-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SUCLA2-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for SUCLA2-AS1 Gene

Proteins for SUCLA2-AS1 Gene

Post-translational modifications for SUCLA2-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SUCLA2-AS1 Gene

Domains & Families for SUCLA2-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SUCLA2-AS1 Gene

Function for SUCLA2-AS1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SUCLA2-AS1 Gene

Localization for SUCLA2-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SUCLA2-AS1 Gene

Pathways & Interactions for SUCLA2-AS1 Gene

PathCards logo

SuperPathways for SUCLA2-AS1 Gene

No Data Available

Interacting Proteins for SUCLA2-AS1 Gene

Gene Ontology (GO) - Biological Process for SUCLA2-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SUCLA2-AS1 Gene

Drugs & Compounds for SUCLA2-AS1 Gene

No Compound Related Data Available

Transcripts for SUCLA2-AS1 Gene

mRNA/cDNA for SUCLA2-AS1 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNA Central transcripts :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for SUCLA2-AS1 Gene

No ASD Table

Relevant External Links for SUCLA2-AS1 Gene

GeneLoc Exon Structure for
SUCLA2-AS1
ECgene alternative splicing isoforms for
SUCLA2-AS1

Expression for SUCLA2-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SUCLA2-AS1 Gene

genes like me logo Genes that share expression patterns with SUCLA2-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SUCLA2-AS1 Gene

Orthologs for SUCLA2-AS1 Gene

Evolution for SUCLA2-AS1 Gene

ENSEMBL:
Gene Tree for SUCLA2-AS1 (if available)
TreeFam:
Gene Tree for SUCLA2-AS1 (if available)

No data available for Orthologs for SUCLA2-AS1 Gene

Paralogs for SUCLA2-AS1 Gene

No data available for Paralogs for SUCLA2-AS1 Gene

Variants for SUCLA2-AS1 Gene

Additional Variant Information for SUCLA2-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SUCLA2-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SUCLA2-AS1 Gene

Disorders for SUCLA2-AS1 Gene

Additional Disease Information for SUCLA2-AS1

No disorders were found for SUCLA2-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SUCLA2-AS1 Gene

Publications for SUCLA2-AS1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for SUCLA2-AS1 Gene

Sources for SUCLA2-AS1 Gene

Content
Loading form....