Aliases for SUB1P3 Gene

Aliases for SUB1P3 Gene

  • SUB1 Pseudogene 3 2 3 5
  • SUB1 Homolog, Transcriptional Regulator Pseudogene 3 2 3
  • SUB1 Homolog (S. Cerevisiae) Pseudogene 3 2
  • SUB1 Homolog Pseudogene 3 3
  • SUB1P3 5

External Ids for SUB1P3 Gene

Previous GeneCards Identifiers for SUB1P3 Gene

  • GC16M004614
  • GC16M004573
  • GC16M004574
  • GC16M004585

Summaries for SUB1P3 Gene

GeneCards Summary for SUB1P3 Gene

SUB1P3 (SUB1 Pseudogene 3) is a Pseudogene.

Additional gene information for SUB1P3 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for SUB1P3 Gene

Genomics for SUB1P3 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for SUB1P3 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J004561 Enhancer 0.3 Ensembl 600.7 +1.5 1548 1.4 PRDM10 CEBPB ENSG00000261789 SUB1P3 lnc-CDIP1-2 piR-35674-176 NMRAL1 MGRN1 CDIP1 C16orf96 UBALD1
GH16J004575 Enhancer 0.5 Ensembl ENCODE 0.4 -12.1 -12106 1.1 CTCF RAD21 MGRN1 HMOX2 lnc-UBALD1-3 SUB1P3 UBALD1 C16orf96 CDIP1
GH16J004570 Enhancer 0.5 ENCODE 0.4 -7.8 -7811 1.3 RNF2 TEAD4 POLR2A TAF1 TBP NMRAL1 CDIP1 HMOX2 SUB1P3 lnc-UBALD1-3 C16orf96 UBALD1
GH16J004572 Enhancer 0.4 Ensembl 0.4 -9.7 -9652 0.2 TCF12 ATF3 MYC MAX MGRN1 SUB1P3 lnc-UBALD1-3 C16orf96 CDIP1 UBALD1
GH16J004569 Enhancer 0.3 ENCODE 0.4 -6.6 -6579 0.9 KDM1A ZNF121 SUB1P3 lnc-UBALD1-3 C16orf96 CDIP1 UBALD1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around SUB1P3 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for SUB1P3 Gene

Genomic Locations for SUB1P3 Gene
chr16:4,562,616-4,563,249
(GRCh38/hg38)
Size:
634 bases
Orientation:
Minus strand
chr16:4,612,815-4,613,129
(GRCh37/hg19)
Size:
315 bases
Orientation:
Minus strand

Genomic View for SUB1P3 Gene

Genes around SUB1P3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SUB1P3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SUB1P3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SUB1P3 Gene

Proteins for SUB1P3 Gene

Post-translational modifications for SUB1P3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SUB1P3 Gene

Domains & Families for SUB1P3 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for SUB1P3 Gene

Function for SUB1P3 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SUB1P3 Gene

Localization for SUB1P3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SUB1P3 Gene

Pathways & Interactions for SUB1P3 Gene

PathCards logo

SuperPathways for SUB1P3 Gene

No Data Available

Gene Ontology (GO) - Biological Process for SUB1P3 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for SUB1P3 Gene

Drugs & Compounds for SUB1P3 Gene

No Compound Related Data Available

Transcripts for SUB1P3 Gene

mRNA/cDNA for SUB1P3 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SUB1P3 Gene

No ASD Table

Relevant External Links for SUB1P3 Gene

GeneLoc Exon Structure for
SUB1P3

Expression for SUB1P3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for SUB1P3 Gene

genes like me logo Genes that share expression patterns with SUB1P3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SUB1P3 Gene

Orthologs for SUB1P3 Gene

Evolution for SUB1P3 Gene

ENSEMBL:
Gene Tree for SUB1P3 (if available)
TreeFam:
Gene Tree for SUB1P3 (if available)

No data available for Orthologs for SUB1P3 Gene

Paralogs for SUB1P3 Gene

No data available for Paralogs for SUB1P3 Gene

Variants for SUB1P3 Gene

Additional Variant Information for SUB1P3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SUB1P3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SUB1P3 Gene

Disorders for SUB1P3 Gene

No disorders were found for SUB1P3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SUB1P3 Gene

Publications for SUB1P3 Gene

No publications were found for SUB1P3 Gene.

No data available for Mastermind for SUB1P3 Gene

Products for SUB1P3 Gene

Sources for SUB1P3 Gene