Aliases for STK19B Gene

Aliases for STK19B Gene

  • Serine/Threonine Kinase 19B (Pseudogene) 2 3 5
  • Serine/Threonine Kinase 19 Pseudogene 2 3
  • BPG116M5.10 3
  • STK19P 3
  • RP2 3

External Ids for STK19B Gene

Previous HGNC Symbols for STK19B Gene

  • STK19P

Summaries for STK19B Gene

GeneCards Summary for STK19B Gene

STK19B (Serine/Threonine Kinase 19B (Pseudogene)) is a Pseudogene.

Additional gene information for STK19B Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for STK19B Gene

Genomics for STK19B Gene

GeneHancer (GH) Regulatory Elements for STK19B Gene

Promoters and enhancers for STK19B Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J032014 Promoter/Enhancer 0.7 EPDnew Ensembl dbSUPER 500.7 +1.5 1530 2 C4B JA662169 NONHSAG045779.2-002 TNXA STK19B lnc-C4B-1 RF00017-5418
GH06J032012 Enhancer 0.6 Ensembl dbSUPER 500.7 -0.4 -430 1 ZNF592 L3MBTL2 NR4A1 CBFA2T3 MGA C4B JA662169 TNXA STK19B lnc-C4B-1 NONHSAG045971.2 RF00017-5418
GH06J031813 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 20.6 -187.0 -187038 26.3 FOXK2 HNRNPK ZBTB40 ZNF217 EP300 CTCF SIN3A NRF1 TCF12 POLR2G SNHG32 HSPA1B HSPA1A HSPA1L RF00495-002 DDX39B ATF6B LY6G5B LSM2 GTF2H4
GH06J032184 Promoter/Enhancer 2.5 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 16.1 +178.3 178312 12.8 EP300 HNRNPK ZBTB40 ZNF217 CTCF SIN3A NRF1 TCF12 MYC POLR2G NOTCH4 GPSM3 HSALNG0049384 PBX2 piR-33614-237 DDX39B ATF6B HLA-DRB1 BRD2 MICA
GH06J032175 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 16.9 +164.1 164090 5.9 FOXK2 HNRNPK ZBTB40 ZNF217 EP300 SIN3A NRF1 POLR2G USF1 SP1 RNF5 AGPAT1 DDX39B LY6G5B BRD2 LSM2 ATF6B MSH5 MICA TNXB
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around STK19B on UCSC Golden Path with GeneCards custom track

Genomic Locations for STK19B Gene

Genomic Locations for STK19B Gene
chr6:32,013,270-32,014,184
(GRCh38/hg38)
Size:
915 bases
Orientation:
Plus strand
chr6:31,981,047-31,981,961
(GRCh37/hg19)
Size:
915 bases
Orientation:
Plus strand

Genomic View for STK19B Gene

Genes around STK19B on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
STK19B Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for STK19B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for STK19B Gene

Proteins for STK19B Gene

Post-translational modifications for STK19B Gene

No Post-translational modifications

No data available for DME Specific Peptides for STK19B Gene

Domains & Families for STK19B Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for STK19B Gene

Function for STK19B Gene

Phenotypes From GWAS Catalog for STK19B Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for STK19B Gene

Localization for STK19B Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for STK19B Gene

Pathways & Interactions for STK19B Gene

PathCards logo

SuperPathways for STK19B Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for STK19B Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for STK19B Gene

Drugs & Compounds for STK19B Gene

No Compound Related Data Available

Transcripts for STK19B Gene

mRNA/cDNA for STK19B Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for STK19B Gene

No ASD Table

Relevant External Links for STK19B Gene

GeneLoc Exon Structure for
STK19B

Expression for STK19B Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for STK19B Gene

genes like me logo Genes that share expression patterns with STK19B: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for STK19B Gene

Orthologs for STK19B Gene

Evolution for STK19B Gene

ENSEMBL:
Gene Tree for STK19B (if available)
TreeFam:
Gene Tree for STK19B (if available)

No data available for Orthologs for STK19B Gene

Paralogs for STK19B Gene

No data available for Paralogs for STK19B Gene

Variants for STK19B Gene

Additional Variant Information for STK19B Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
STK19B

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for STK19B Gene

Disorders for STK19B Gene

No disorders were found for STK19B Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for STK19B Gene

Publications for STK19B Gene

  1. Structure and genetics of the partially duplicated gene RP located immediately upstream of the complement C4A and the C4B genes in the HLA class III region. Molecular cloning, exon-intron structure, composite retroposon, and breakpoint of gene duplication. (PMID: 8132574) Shen L … Yu CY (The Journal of biological chemistry 1994) 2 3 54
  2. The complete exon-intron structure of a human complement component C4A gene. DNA sequences, polymorphism, and linkage to the 21-hydroxylase gene. (PMID: 1988494) Yu CY (Journal of immunology (Baltimore, Md. : 1950) 1991) 3 54
  3. Structural basis of the polymorphism of human complement components C4A and C4B: gene size, reactivity and antigenicity. (PMID: 2431902) Yu CY … Porter RR (The EMBO journal 1986) 3 54

Products for STK19B Gene

Sources for STK19B Gene