Aliases for STIM1-AS1 Gene

Subcategory (RNA class) for STIM1-AS1 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for STIM1-AS1 Gene

  • STIM1 Antisense RNA 1 2 3
  • Novel Transcript 5
  • NONHSAG007478.2 91
  • HSALNG0082330 164
  • AC090587.1 5
  • Lnc-RHOG-2 165

External Ids for STIM1-AS1 Gene

Summaries for STIM1-AS1 Gene

GeneCards Summary for STIM1-AS1 Gene

STIM1-AS1 (STIM1 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for STIM1-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for STIM1-AS1 Gene

Genomics for STIM1-AS1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for STIM1-AS1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around STIM1-AS1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for STIM1-AS1 Gene

Genomic Locations for STIM1-AS1 Gene
chr11:3,853,575-3,855,560
(GRCh38/hg38)
Size:
1,986 bases
Orientation:
Minus strand
chr11:3,875,548-3,876,739
(GRCh37/hg19)
Size:
1,192 bases
Orientation:
Minus strand

Genomic View for STIM1-AS1 Gene

Genes around STIM1-AS1 on UCSC Golden Path with GeneCards custom track
STIM1-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
STIM1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for STIM1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for STIM1-AS1 Gene

Proteins for STIM1-AS1 Gene

Post-translational modifications for STIM1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for STIM1-AS1 Gene

Domains & Families for STIM1-AS1 Gene

Gene Families for STIM1-AS1 Gene

genes like me logo Genes that share domains with STIM1-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for STIM1-AS1 Gene

Function for STIM1-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for STIM1-AS1 Gene

Localization for STIM1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for STIM1-AS1 Gene

Pathways & Interactions for STIM1-AS1 Gene

PathCards logo

SuperPathways for STIM1-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for STIM1-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for STIM1-AS1 Gene

Drugs & Compounds for STIM1-AS1 Gene

No Compound Related Data Available

Transcripts for STIM1-AS1 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for STIM1-AS1 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00003B4C7A_9606 lncRNA 494 3

Ensembl: ENST00000415809 (view in UCSC) ,

LNCipedia: lnc-RHOG-2:1,

NONCODE: NONHSAT017627.2,

URS0000D5BF4E_9606 lncRNA 1016 2

LncBook: HSALNT0171345,

LNCipedia: lnc-RHOG-2:2,

URS0000D59CAA_9606 lncRNA 1986 1

LNCipedia: lnc-RHOG-2:3,

URS0000D57FCE_9606 lncRNA 545 1

LNCipedia: lnc-RHOG-2:4,

STIM1-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for STIM1-AS1 Gene

No ASD Table

Relevant External Links for STIM1-AS1 Gene

GeneLoc Exon Structure for
STIM1-AS1

No data available for mRNA/cDNA for STIM1-AS1 Gene

Expression for STIM1-AS1 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for STIM1-AS1

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for STIM1-AS1 Gene

Orthologs for STIM1-AS1 Gene

Evolution for STIM1-AS1 Gene

ENSEMBL:
Gene Tree for STIM1-AS1 (if available)
TreeFam:
Gene Tree for STIM1-AS1 (if available)

No data available for Orthologs for STIM1-AS1 Gene

Paralogs for STIM1-AS1 Gene

No data available for Paralogs for STIM1-AS1 Gene

Variants for STIM1-AS1 Gene

Additional dbSNP identifiers (rs#s) for STIM1-AS1 Gene

Additional Variant Information for STIM1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
STIM1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for STIM1-AS1 Gene

Disorders for STIM1-AS1 Gene

Additional Disease Information for STIM1-AS1

No disorders were found for STIM1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for STIM1-AS1 Gene

Publications for STIM1-AS1 Gene

No publications were found for STIM1-AS1 Gene.

No data available for Mastermind for STIM1-AS1 Gene

Products for STIM1-AS1 Gene

Sources for STIM1-AS1 Gene