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Aliases for STAU2-AS1 Gene

Subcategory (RNA class) for STAU2-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for STAU2-AS1 Gene

  • STAU2 Antisense RNA 1 2 3 5
  • STAU2 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for STAU2-AS1 Gene

Previous GeneCards Identifiers for STAU2-AS1 Gene

  • GC08P074334

Summaries for STAU2-AS1 Gene

GeneCards Summary for STAU2-AS1 Gene

STAU2-AS1 (STAU2 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for STAU2-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for STAU2-AS1 Gene

Genomics for STAU2-AS1 Gene

GeneHancer (GH) Regulatory Elements for STAU2-AS1 Gene

Promoters and enhancers for STAU2-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08I073419 Enhancer 1.2 Ensembl ENCODE 550.8 +0.4 376 2.7 PKNOX1 FOXA2 ARNT SIN3A FEZF1 ZNF2 BRCA1 FOS SP3 REST STAU2-AS1 GC08M073453 STAU2
GH08I073423 Enhancer 0.8 ENCODE 0.8 +3.6 3647 0.6 MAX KLF17 FEZF1 ZIC2 RFX5 ZNF335 ZFHX2 CTBP1 GATA3 POLR2A STAU2-AS1 GC08M073453 STAU2
GH08I073458 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +40.2 40165 4 MEIS2 ATF1 RFX1 L3MBTL2 TEAD4 BHLHE40 ZKSCAN1 ZFHX2 EGR1 HNF4A GC08M073453 RDH10 JPH1 STAU2-AS1 STAU2
GH08I073450 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.3 +31.5 31486 2.3 MEIS2 PKNOX1 PRDM6 ZSCAN5C FOXP2 ZIC2 RDH10 GC08M073453 STAU2-AS1 STAU2
GH08I073369 Enhancer 1.2 Ensembl ENCODE 0.2 -48.8 -48784 2.9 HDGF ATF1 PKNOX1 ARNT SIN3A TCF12 ZNF766 GATA2 FOS ATF7 LOC105375899 STAU2-AS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around STAU2-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for STAU2-AS1 Gene

Genomic Locations for STAU2-AS1 Gene
chr8:73,420,004-73,441,526
(GRCh38/hg38)
Size:
21,523 bases
Orientation:
Plus strand
chr8:74,332,239-74,353,761
(GRCh37/hg19)

Genomic View for STAU2-AS1 Gene

Genes around STAU2-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
STAU2-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for STAU2-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for STAU2-AS1 Gene

Proteins for STAU2-AS1 Gene

Post-translational modifications for STAU2-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for STAU2-AS1 Gene

Domains & Families for STAU2-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for STAU2-AS1 Gene

Function for STAU2-AS1 Gene

Phenotypes From GWAS Catalog for STAU2-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for STAU2-AS1 Gene

Localization for STAU2-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for STAU2-AS1 Gene

Pathways & Interactions for STAU2-AS1 Gene

SuperPathways for STAU2-AS1 Gene

No Data Available

Interacting Proteins for STAU2-AS1 Gene

Gene Ontology (GO) - Biological Process for STAU2-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for STAU2-AS1 Gene

Drugs & Compounds for STAU2-AS1 Gene

No Compound Related Data Available

Transcripts for STAU2-AS1 Gene

mRNA/cDNA for STAU2-AS1 Gene

(2) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for STAU2-AS1 Gene

STAU2 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for STAU2-AS1 Gene

No ASD Table

Relevant External Links for STAU2-AS1 Gene

GeneLoc Exon Structure for
STAU2-AS1
ECgene alternative splicing isoforms for
STAU2-AS1

Expression for STAU2-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for STAU2-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for STAU2-AS1 Gene

This gene is overexpressed in Minor Salivary Gland (x6.4).

SOURCE GeneReport for Unigene cluster for STAU2-AS1 Gene:

Hs.679921
genes like me logo Genes that share expression patterns with STAU2-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for STAU2-AS1 Gene

Orthologs for STAU2-AS1 Gene

Evolution for STAU2-AS1 Gene

ENSEMBL:
Gene Tree for STAU2-AS1 (if available)
TreeFam:
Gene Tree for STAU2-AS1 (if available)

No data available for Orthologs for STAU2-AS1 Gene

Paralogs for STAU2-AS1 Gene

No data available for Paralogs for STAU2-AS1 Gene

Variants for STAU2-AS1 Gene

Sequence variations from dbSNP and Humsavar for STAU2-AS1 Gene

SNP ID Clin Chr 08 pos Variation AA Info Type
rs1000322943 -- 73,432,432(+) T/C intron_variant
rs1000375392 -- 73,432,696(+) C/T intron_variant
rs1000594855 -- 73,438,246(+) A/G/T intron_variant
rs1000771537 -- 73,427,784(+) T/C intron_variant
rs1000798121 -- 73,432,688(+) C/A/T intron_variant

Structural Variations from Database of Genomic Variants (DGV) for STAU2-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv524697 CNV loss 19592680
nsv522502 CNV loss 19592680
nsv1124352 CNV deletion 24896259
nsv1020902 CNV loss 25217958
esv3617635 CNV gain 21293372
esv3617634 CNV loss 21293372
esv28754 CNV loss 19812545
esv2737154 CNV deletion 23290073
esv2671792 CNV deletion 23128226

Additional Variant Information for STAU2-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
STAU2-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for STAU2-AS1 Gene

Disorders for STAU2-AS1 Gene

Additional Disease Information for STAU2-AS1

No disorders were found for STAU2-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for STAU2-AS1 Gene

Publications for STAU2-AS1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58

Products for STAU2-AS1 Gene

Sources for STAU2-AS1 Gene

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