STARD7-AS1 Gene (RNA Gene)

STARD7 Antisense RNA 1

GC02P096208
GIFtS:
16
See more...

Aliases for STARD7-AS1 Gene

Subcategory (RNA class) for STARD7-AS1 Gene

lncRNA

Number of RNA Genes sources:

2 / 17

Aliases for STARD7-AS1 Gene

  • STARD7 Antisense RNA 1 2 3 5
  • STARD7-AS1 2 5 165
  • NONHSAG028607.2 91

External Ids for STARD7-AS1 Gene

Previous GeneCards Identifiers for STARD7-AS1 Gene

  • GC02P096877

Summaries for STARD7-AS1 Gene

GeneCards Summary for STARD7-AS1 Gene

STARD7-AS1 (STARD7 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for STARD7-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for STARD7-AS1 Gene

Genomics for STARD7-AS1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for STARD7-AS1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around STARD7-AS1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for STARD7-AS1 Gene

Genomic Locations for STARD7-AS1 Gene
chr2:96,208,403-96,243,353
(GRCh38/hg38)
Size:
34,951 bases
Orientation:
Plus strand
chr2:96,874,154-96,908,359
(GRCh37/hg19)
Size:
34,206 bases
Orientation:
Plus strand

Genomic View for STARD7-AS1 Gene

Genes around STARD7-AS1 on UCSC Golden Path with GeneCards custom track
STARD7-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
STARD7-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for STARD7-AS1 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for STARD7-AS1 Gene

Proteins for STARD7-AS1 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for STARD7-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for STARD7-AS1 Gene

Domains & Families for STARD7-AS1 Gene

Gene Families for STARD7-AS1 Gene

HGNC:
genes like me logo Genes that share domains with STARD7-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for STARD7-AS1 Gene

Function for STARD7-AS1 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for STARD7-AS1 Gene

genes like me logo Genes that share phenotypes with STARD7-AS1: view

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for STARD7-AS1

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for STARD7-AS1 Gene

Localization for STARD7-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for STARD7-AS1 Gene

Pathways & Interactions for STARD7-AS1 Gene

PathCards logo

SuperPathways for STARD7-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for STARD7-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for STARD7-AS1 Gene

Drugs & Compounds for STARD7-AS1 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for STARD7-AS1 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

Non-coding RNA (ncRNA) Transcripts from RNAcentral for STARD7-AS1 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00009B7537_9606 lncRNA 514 3

Ensembl: ENST00000614453 (view in UCSC) ,

LNCipedia: STARD7-AS1:4,

NONCODE: NONHSAT182195.1,

URS000075C0AB_9606 lncRNA 2482 2

HGNC: 40827,

RefSeq: NR_046322,

URS00008B30D1_9606 lncRNA 1527 2

Ensembl: ENST00000446816 (view in UCSC) ,

NONCODE: NONHSAT072549.2,

URS0000EF5EBB_9606 lncRNA 3637 1

Ensembl: ENST00000665242 (view in UCSC) ,

URS0000EF4961_9606 lncRNA 3458 1

Ensembl: ENST00000659123 (view in UCSC) ,

STARD7-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for STARD7-AS1 Gene

1 REFSEQ mRNAs :
5 NCBI additional mRNA sequence :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for STARD7-AS1

Alternative Splicing Database (ASD) splice patterns (SP) for STARD7-AS1 Gene

No ASD Table

Relevant External Links for STARD7-AS1 Gene

GeneLoc Exon Structure for
STARD7-AS1

Expression for STARD7-AS1 Gene

Products:

  1. Primer
  2. Gene Expression Assay

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for STARD7-AS1 Gene

mRNA expression in normal human tissues for STARD7-AS1 Gene
mRNA expression by GTEx for STARD7-AS1 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for STARD7-AS1

genes like me logo Genes that share expression patterns with STARD7-AS1: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for STARD7-AS1 Gene

Orthologs for STARD7-AS1 Gene

Evolution for STARD7-AS1 Gene

ENSEMBL:
Gene Tree for STARD7-AS1 (if available)
TreeFam:
Gene Tree for STARD7-AS1 (if available)

No data available for Orthologs for STARD7-AS1 Gene

Paralogs for STARD7-AS1 Gene

No data available for Paralogs for STARD7-AS1 Gene

Variants for STARD7-AS1 Gene

Products:

  1. SNP Genotyping and Copy Number Assay

Additional dbSNP identifiers (rs#s) for STARD7-AS1 Gene

Structural Variations from Database of Genomic Variants (DGV) for STARD7-AS1 Gene

Variant ID Type Subtype PubMed ID
dgv607e201 CNV deletion 23290073
esv3425717 CNV duplication 20981092
esv3591652 OTHER inversion 21293372
esv5003 OTHER complex 18987735
nsv1135873 CNV deletion 24896259
nsv834305 CNV gain 17160897
nsv963665 CNV duplication 23825009

Additional Variant Information for STARD7-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
STARD7-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for STARD7-AS1 Gene

Disorders for STARD7-AS1 Gene

Additional Disease Information for STARD7-AS1

ATLAS of Genetics and Cytogenetics in Oncology and Haematology
Open Targets Platform

No disorders were found for STARD7-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for STARD7-AS1 Gene

Publications for STARD7-AS1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3

No data available for Mastermind for STARD7-AS1 Gene

Products for STARD7-AS1 Gene

Sources for STARD7-AS1 Gene