Aliases for ST3GAL3-AS1 Gene

Subcategory (RNA class) for ST3GAL3-AS1 Gene

lncRNA

Number of RNA Genes sources:

2 / 17

Aliases for ST3GAL3-AS1 Gene

  • ST3GAL3 Antisense RNA 1 2 3
  • Novel Transcript 5
  • NONHSAG001244.2 91
  • AL451062.1 5
  • Lnc-HYI-3 165

External Ids for ST3GAL3-AS1 Gene

Summaries for ST3GAL3-AS1 Gene

GeneCards Summary for ST3GAL3-AS1 Gene

ST3GAL3-AS1 (ST3GAL3 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ST3GAL3-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ST3GAL3-AS1 Gene

Genomics for ST3GAL3-AS1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ST3GAL3-AS1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ST3GAL3-AS1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ST3GAL3-AS1 Gene

Genomic Locations for ST3GAL3-AS1 Gene
chr1:43,709,392-43,727,343
(GRCh38/hg38)
Size:
17,952 bases
Orientation:
Minus strand
chr1:44,175,063-44,193,014
(GRCh37/hg19)
Size:
17,952 bases
Orientation:
Minus strand

Genomic View for ST3GAL3-AS1 Gene

Genes around ST3GAL3-AS1 on UCSC Golden Path with GeneCards custom track
ST3GAL3-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ST3GAL3-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ST3GAL3-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ST3GAL3-AS1 Gene

Proteins for ST3GAL3-AS1 Gene

Post-translational modifications for ST3GAL3-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ST3GAL3-AS1 Gene

Domains & Families for ST3GAL3-AS1 Gene

Gene Families for ST3GAL3-AS1 Gene

genes like me logo Genes that share domains with ST3GAL3-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ST3GAL3-AS1 Gene

Function for ST3GAL3-AS1 Gene

Phenotypes From GWAS Catalog for ST3GAL3-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ST3GAL3-AS1 Gene

Localization for ST3GAL3-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ST3GAL3-AS1 Gene

Pathways & Interactions for ST3GAL3-AS1 Gene

PathCards logo

SuperPathways for ST3GAL3-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ST3GAL3-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ST3GAL3-AS1 Gene

Drugs & Compounds for ST3GAL3-AS1 Gene

No Compound Related Data Available

Transcripts for ST3GAL3-AS1 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ST3GAL3-AS1 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00005C9EA5_9606 lncRNA 469 4

RefSeq: NR_125986,

Ensembl: ENST00000437753 (view in UCSC) ,

LNCipedia: lnc-HYI-3:1,

NONCODE: NONHSAT002824.2,

URS0000D57CFA_9606 lncRNA 456 1

LNCipedia: lnc-HYI-3:2,

ST3GAL3-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for ST3GAL3-AS1 Gene

1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for ST3GAL3-AS1 Gene

No ASD Table

Relevant External Links for ST3GAL3-AS1 Gene

GeneLoc Exon Structure for
ST3GAL3-AS1

Expression for ST3GAL3-AS1 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for ST3GAL3-AS1

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ST3GAL3-AS1 Gene

Orthologs for ST3GAL3-AS1 Gene

Evolution for ST3GAL3-AS1 Gene

ENSEMBL:
Gene Tree for ST3GAL3-AS1 (if available)
TreeFam:
Gene Tree for ST3GAL3-AS1 (if available)

No data available for Orthologs for ST3GAL3-AS1 Gene

Paralogs for ST3GAL3-AS1 Gene

No data available for Paralogs for ST3GAL3-AS1 Gene

Variants for ST3GAL3-AS1 Gene

Additional dbSNP identifiers (rs#s) for ST3GAL3-AS1 Gene

Additional Variant Information for ST3GAL3-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ST3GAL3-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ST3GAL3-AS1 Gene

Disorders for ST3GAL3-AS1 Gene

Additional Disease Information for ST3GAL3-AS1

No disorders were found for ST3GAL3-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ST3GAL3-AS1 Gene

Publications for ST3GAL3-AS1 Gene

No publications were found for ST3GAL3-AS1 Gene.

No data available for Mastermind for ST3GAL3-AS1 Gene

Products for ST3GAL3-AS1 Gene

Sources for ST3GAL3-AS1 Gene