Aliases for ST13P6 Gene

Aliases for ST13P6 Gene

  • ST13, Hsp70 Interacting Protein Pseudogene 6 2 3 5
  • Suppression Of Tumorigenicity 13 (Colon Carcinoma) (Hsp70 Interacting Protein) Pseudogene 6 2 3
  • Family With Sequence Similarity 10, Member A6 2 3
  • FAM10A6P 3
  • FAM10A6 3

External Ids for ST13P6 Gene

Previous HGNC Symbols for ST13P6 Gene

  • FAM10A6

Previous GeneCards Identifiers for ST13P6 Gene

  • GC08P134421

Summaries for ST13P6 Gene

GeneCards Summary for ST13P6 Gene

ST13P6 (ST13, Hsp70 Interacting Protein Pseudogene 6) is a Pseudogene.

Additional gene information for ST13P6 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ST13P6 Gene

Genomics for ST13P6 Gene

GeneHancer (GH) Regulatory Elements for ST13P6 Gene

Promoters and enhancers for ST13P6 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J133405 Promoter/Enhancer 1.2 Ensembl ENCODE dbSUPER 500.7 -0.7 -667 2.4 CTCF REST TOE1 CREB1 BRCA1 ARNT JUN NR2F2 ELF1 BATF ST13P6 lnc-ST3GAL1-1 ENSG00000253638 lnc-ST3GAL1-3
GH08J133403 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 0.7 -4.0 -3963 2.6 NONO FOXA1 TRIM22 ZNF148 RAD51 HES1 USF1 SRF ZNF207 MLLT1 TG ST3GAL1 SLA ST13P6 lnc-ST3GAL1-1 ENSG00000253638 lnc-ST3GAL1-3
GH08J133400 Enhancer 0.7 FANTOM5 Ensembl 0.4 -7.8 -7763 1 KDM1A BCOR ZMYM3 ZNF146 ZBTB7B HMG20A SMARCA5 ST3GAL1 ENSG00000253638 ST13P6 lnc-ST3GAL1-1 lnc-ST3GAL1-3
GH08J133397 Enhancer 0.7 FANTOM5 Ensembl ENCODE 0.4 -10.2 -10164 1.4 ZBTB11 STAT3 ST3GAL1 ENSG00000253638 lnc-ST3GAL1-3 lnc-ST3GAL1-1 ST13P6
GH08J133406 Enhancer 0.3 Ensembl dbSUPER 0.7 -2.2 -2163 0.2 ST13P6 lnc-ST3GAL1-1 ENSG00000253638 lnc-ST3GAL1-3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ST13P6 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ST13P6 Gene

Genomic Locations for ST13P6 Gene
chr8:133,407,664-133,409,525
(GRCh38/hg38)
Size:
1,862 bases
Orientation:
Plus strand
chr8:134,420,107-134,421,768
(GRCh37/hg19)
Size:
1,662 bases
Orientation:
Plus strand

Genomic View for ST13P6 Gene

Genes around ST13P6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ST13P6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ST13P6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ST13P6 Gene

Proteins for ST13P6 Gene

Post-translational modifications for ST13P6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ST13P6 Gene

Domains & Families for ST13P6 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ST13P6 Gene

Function for ST13P6 Gene

Phenotypes From GWAS Catalog for ST13P6 Gene

Phenotypes for ST13P6 Gene

genes like me logo Genes that share phenotypes with ST13P6: view

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ST13P6 Gene

Localization for ST13P6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ST13P6 Gene

Pathways & Interactions for ST13P6 Gene

PathCards logo

SuperPathways for ST13P6 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ST13P6 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ST13P6 Gene

Drugs & Compounds for ST13P6 Gene

No Compound Related Data Available

Transcripts for ST13P6 Gene

mRNA/cDNA for ST13P6 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for ST13P6 Gene

No ASD Table

Relevant External Links for ST13P6 Gene

GeneLoc Exon Structure for
ST13P6

Expression for ST13P6 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ST13P6 Gene

genes like me logo Genes that share expression patterns with ST13P6: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ST13P6 Gene

Orthologs for ST13P6 Gene

Evolution for ST13P6 Gene

ENSEMBL:
Gene Tree for ST13P6 (if available)
TreeFam:
Gene Tree for ST13P6 (if available)

No data available for Orthologs for ST13P6 Gene

Paralogs for ST13P6 Gene

No data available for Paralogs for ST13P6 Gene

Variants for ST13P6 Gene

Additional Variant Information for ST13P6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ST13P6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ST13P6 Gene

Disorders for ST13P6 Gene

Additional Disease Information for ST13P6

No disorders were found for ST13P6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ST13P6 Gene

Publications for ST13P6 Gene

  1. Characterization of FAM10A4, a member of the ST13 tumor suppressor gene family that maps to the 13q14.3 region associated with B-Cell leukemia, multiple myeloma, and prostate cancer. (PMID: 12079276) Sossey-Alaoui K … Cowell JK (Genomics 2002) 3 54

Products for ST13P6 Gene

Sources for ST13P6 Gene